Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cln6Q3U466 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cln6Q3U466 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln6Q3U466 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cln6Q3U466 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cln6Q3U466 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln6Q3U466 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cln6Q3U466 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln6Q3U466 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln6Q3U466 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cln6Q3U466 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln6Q3U466 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln6Q3U466 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cln6Q3U466 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cln6Q3U466 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cln6Q3U466 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cln6Q3U466 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cln6Q3U466 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cln6Q3U466 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cln6Q3U466 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cln6Q3U466 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cln6Q3U466 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cln6Q3U466 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Cln6Q3U466 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.58■□□□□ 0.41
Cln6Q3U466 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cln6Q3U466 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cln6Q3U466 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cln6Q3U466 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cln6Q3U466 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cln6Q3U466 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cln6Q3U466 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cln6Q3U466 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cln6Q3U466 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln6Q3U466 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cln6Q3U466 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cln6Q3U466 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln6Q3U466 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln6Q3U466 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cln6Q3U466 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln6Q3U466 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln6Q3U466 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln6Q3U466 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cln6Q3U466 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln6Q3U466 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cln6Q3U466 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln6Q3U466 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.57■□□□□ 0.4
Cln6Q3U466 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cln6Q3U466 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln6Q3U466 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln6Q3U466 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cln6Q3U466 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cln6Q3U466 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.56■□□□□ 0.4
Cln6Q3U466 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln6Q3U466 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln6Q3U466 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cln6Q3U466 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cln6Q3U466 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cln6Q3U466 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cln6Q3U466 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cln6Q3U466 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cln6Q3U466 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cln6Q3U466 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cln6Q3U466 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cln6Q3U466 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Cln6Q3U466 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cln6Q3U466 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cln6Q3U466 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cln6Q3U466 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cln6Q3U466 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln6Q3U466 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln6Q3U466 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln6Q3U466 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln6Q3U466 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln6Q3U466 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln6Q3U466 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln6Q3U466 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln6Q3U466 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cln6Q3U466 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.54■□□□□ 0.4
Cln6Q3U466 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln6Q3U466 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cln6Q3U466 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln6Q3U466 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cln6Q3U466 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln6Q3U466 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln6Q3U466 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln6Q3U466 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln6Q3U466 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.53■□□□□ 0.4
Cln6Q3U466 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cln6Q3U466 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cln6Q3U466 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln6Q3U466 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln6Q3U466 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln6Q3U466 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln6Q3U466 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cln6Q3U466 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cln6Q3U466 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cln6Q3U466 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cln6Q3U466 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cln6Q3U466 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cln6Q3U466 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 134.2 ms