Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Khdc4Q3TCX3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Khdc4Q3TCX3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Khdc4Q3TCX3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Khdc4Q3TCX3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Khdc4Q3TCX3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Khdc4Q3TCX3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Khdc4Q3TCX3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Khdc4Q3TCX3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.71■□□□□ 0.75
Khdc4Q3TCX3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Khdc4Q3TCX3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.7■□□□□ 0.74
Khdc4Q3TCX3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Khdc4Q3TCX3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Khdc4Q3TCX3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Khdc4Q3TCX3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Khdc4Q3TCX3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Khdc4Q3TCX3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.69■□□□□ 0.74
Khdc4Q3TCX3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Khdc4Q3TCX3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Khdc4Q3TCX3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Khdc4Q3TCX3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Khdc4Q3TCX3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Khdc4Q3TCX3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Khdc4Q3TCX3 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.69■□□□□ 0.74
Khdc4Q3TCX3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Khdc4Q3TCX3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.68■□□□□ 0.74
Khdc4Q3TCX3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.68■□□□□ 0.74
Khdc4Q3TCX3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Khdc4Q3TCX3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Khdc4Q3TCX3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Khdc4Q3TCX3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Khdc4Q3TCX3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Khdc4Q3TCX3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Khdc4Q3TCX3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Khdc4Q3TCX3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Khdc4Q3TCX3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Khdc4Q3TCX3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Khdc4Q3TCX3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Khdc4Q3TCX3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.67■□□□□ 0.74
Khdc4Q3TCX3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Khdc4Q3TCX3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Khdc4Q3TCX3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Khdc4Q3TCX3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Khdc4Q3TCX3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Khdc4Q3TCX3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Khdc4Q3TCX3 Gm21956-201ENSMUST00000179946 522 ntBASIC19.66■□□□□ 0.74
Khdc4Q3TCX3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Khdc4Q3TCX3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Khdc4Q3TCX3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.66■□□□□ 0.74
Khdc4Q3TCX3 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.66■□□□□ 0.74
Khdc4Q3TCX3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Khdc4Q3TCX3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc4Q3TCX3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc4Q3TCX3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Khdc4Q3TCX3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc4Q3TCX3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc4Q3TCX3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc4Q3TCX3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc4Q3TCX3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc4Q3TCX3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Khdc4Q3TCX3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc4Q3TCX3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc4Q3TCX3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc4Q3TCX3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc4Q3TCX3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc4Q3TCX3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Khdc4Q3TCX3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Khdc4Q3TCX3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.64■□□□□ 0.73
Khdc4Q3TCX3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.64■□□□□ 0.73
Khdc4Q3TCX3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Khdc4Q3TCX3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Khdc4Q3TCX3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Khdc4Q3TCX3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Khdc4Q3TCX3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Khdc4Q3TCX3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Khdc4Q3TCX3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Khdc4Q3TCX3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Khdc4Q3TCX3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.63■□□□□ 0.73
Khdc4Q3TCX3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Khdc4Q3TCX3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Khdc4Q3TCX3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.63■□□□□ 0.73
Khdc4Q3TCX3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Khdc4Q3TCX3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Khdc4Q3TCX3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Khdc4Q3TCX3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Khdc4Q3TCX3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Khdc4Q3TCX3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Khdc4Q3TCX3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.62■□□□□ 0.73
Khdc4Q3TCX3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Khdc4Q3TCX3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.62■□□□□ 0.73
Khdc4Q3TCX3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Khdc4Q3TCX3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Khdc4Q3TCX3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.62■□□□□ 0.73
Khdc4Q3TCX3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Khdc4Q3TCX3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.62■□□□□ 0.73
Khdc4Q3TCX3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Khdc4Q3TCX3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Khdc4Q3TCX3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Khdc4Q3TCX3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Khdc4Q3TCX3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms