Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.14■■□□□ 1.14
Nhej1Q3KNJ2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.14
Nhej1Q3KNJ2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Nhej1Q3KNJ2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Nhej1Q3KNJ2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.14■■□□□ 1.14
Nhej1Q3KNJ2 Gm11175-201ENSMUST00000116172 543 ntBASIC22.14■■□□□ 1.13
Nhej1Q3KNJ2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.14■■□□□ 1.13
Nhej1Q3KNJ2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Nhej1Q3KNJ2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Nhej1Q3KNJ2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Nhej1Q3KNJ2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Nhej1Q3KNJ2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Nhej1Q3KNJ2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Nhej1Q3KNJ2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Nhej1Q3KNJ2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Nhej1Q3KNJ2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nhej1Q3KNJ2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Nhej1Q3KNJ2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nhej1Q3KNJ2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Nhej1Q3KNJ2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Nhej1Q3KNJ2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nhej1Q3KNJ2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nhej1Q3KNJ2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
Nhej1Q3KNJ2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nhej1Q3KNJ2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nhej1Q3KNJ2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nhej1Q3KNJ2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nhej1Q3KNJ2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Nhej1Q3KNJ2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Nhej1Q3KNJ2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
Nhej1Q3KNJ2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Nhej1Q3KNJ2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.1■■□□□ 1.13
Nhej1Q3KNJ2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Nhej1Q3KNJ2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Nhej1Q3KNJ2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Nhej1Q3KNJ2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Nhej1Q3KNJ2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
Nhej1Q3KNJ2 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.09■■□□□ 1.13
Nhej1Q3KNJ2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Nhej1Q3KNJ2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Nhej1Q3KNJ2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Nhej1Q3KNJ2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Nhej1Q3KNJ2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Nhej1Q3KNJ2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Nhej1Q3KNJ2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Nhej1Q3KNJ2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Nhej1Q3KNJ2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Nhej1Q3KNJ2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Nhej1Q3KNJ2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Nhej1Q3KNJ2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Nhej1Q3KNJ2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nhej1Q3KNJ2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Nhej1Q3KNJ2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nhej1Q3KNJ2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Nhej1Q3KNJ2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nhej1Q3KNJ2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nhej1Q3KNJ2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.06■■□□□ 1.12
Nhej1Q3KNJ2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nhej1Q3KNJ2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nhej1Q3KNJ2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nhej1Q3KNJ2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nhej1Q3KNJ2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nhej1Q3KNJ2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Nhej1Q3KNJ2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Nhej1Q3KNJ2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Nhej1Q3KNJ2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nhej1Q3KNJ2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nhej1Q3KNJ2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Nhej1Q3KNJ2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nhej1Q3KNJ2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.05■■□□□ 1.12
Nhej1Q3KNJ2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nhej1Q3KNJ2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nhej1Q3KNJ2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nhej1Q3KNJ2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Nhej1Q3KNJ2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nhej1Q3KNJ2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.04■■□□□ 1.12
Nhej1Q3KNJ2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.04■■□□□ 1.12
Nhej1Q3KNJ2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nhej1Q3KNJ2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Nhej1Q3KNJ2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Nhej1Q3KNJ2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Nhej1Q3KNJ2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Nhej1Q3KNJ2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.03■■□□□ 1.12
Nhej1Q3KNJ2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Nhej1Q3KNJ2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nhej1Q3KNJ2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nhej1Q3KNJ2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nhej1Q3KNJ2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Nhej1Q3KNJ2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nhej1Q3KNJ2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nhej1Q3KNJ2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nhej1Q3KNJ2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nhej1Q3KNJ2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Nhej1Q3KNJ2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nhej1Q3KNJ2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nhej1Q3KNJ2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nhej1Q3KNJ2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nhej1Q3KNJ2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nhej1Q3KNJ2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nhej1Q3KNJ2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms