Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
Tff1Q08423 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.15■□□□□ 0.34
Tff1Q08423 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tff1Q08423 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tff1Q08423 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tff1Q08423 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.15■□□□□ 0.34
Tff1Q08423 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tff1Q08423 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tff1Q08423 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tff1Q08423 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.15■□□□□ 0.34
Tff1Q08423 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tff1Q08423 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
Tff1Q08423 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tff1Q08423 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tff1Q08423 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tff1Q08423 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.14■□□□□ 0.33
Tff1Q08423 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tff1Q08423 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tff1Q08423 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tff1Q08423 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.13■□□□□ 0.33
Tff1Q08423 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Tff1Q08423 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tff1Q08423 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tff1Q08423 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Tff1Q08423 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tff1Q08423 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tff1Q08423 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tff1Q08423 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tff1Q08423 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tff1Q08423 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Tff1Q08423 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tff1Q08423 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.12■□□□□ 0.33
Tff1Q08423 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tff1Q08423 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Tff1Q08423 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tff1Q08423 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tff1Q08423 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tff1Q08423 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.11■□□□□ 0.33
Tff1Q08423 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tff1Q08423 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.11■□□□□ 0.33
Tff1Q08423 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.11■□□□□ 0.33
Tff1Q08423 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tff1Q08423 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tff1Q08423 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tff1Q08423 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tff1Q08423 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tff1Q08423 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.11■□□□□ 0.33
Tff1Q08423 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tff1Q08423 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tff1Q08423 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.11■□□□□ 0.33
Tff1Q08423 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tff1Q08423 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tff1Q08423 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tff1Q08423 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tff1Q08423 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tff1Q08423 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tff1Q08423 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tff1Q08423 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tff1Q08423 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tff1Q08423 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tff1Q08423 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tff1Q08423 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tff1Q08423 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tff1Q08423 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Tff1Q08423 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tff1Q08423 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.09■□□□□ 0.33
Tff1Q08423 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.09■□□□□ 0.33
Tff1Q08423 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tff1Q08423 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tff1Q08423 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tff1Q08423 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tff1Q08423 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.08■□□□□ 0.33
Tff1Q08423 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tff1Q08423 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Tff1Q08423 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Tff1Q08423 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Tff1Q08423 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tff1Q08423 Gm43566-201ENSMUST00000196851 808 ntBASIC17.08■□□□□ 0.32
Tff1Q08423 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tff1Q08423 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tff1Q08423 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.07■□□□□ 0.32
Tff1Q08423 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tff1Q08423 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tff1Q08423 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tff1Q08423 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tff1Q08423 Gm14117-201ENSMUST00000122417 843 ntBASIC17.07■□□□□ 0.32
Tff1Q08423 Gm45102-201ENSMUST00000207427 857 ntBASIC17.07■□□□□ 0.32
Tff1Q08423 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tff1Q08423 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tff1Q08423 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tff1Q08423 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tff1Q08423 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.07■□□□□ 0.32
Tff1Q08423 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Tff1Q08423 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tff1Q08423 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tff1Q08423 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tff1Q08423 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Tff1Q08423 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Tff1Q08423 Gm13238-201ENSMUST00000117655 780 ntBASIC17.06■□□□□ 0.32
Tff1Q08423 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms