Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col9a1Q05722 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col9a1Q05722 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col9a1Q05722 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col9a1Q05722 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col9a1Q05722 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.82■□□□□ 0.92
Col9a1Q05722 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col9a1Q05722 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.81■□□□□ 0.92
Col9a1Q05722 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col9a1Q05722 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col9a1Q05722 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.8■□□□□ 0.92
Col9a1Q05722 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col9a1Q05722 Gm12527-201ENSMUST00000117967 564 ntBASIC20.79■□□□□ 0.92
Col9a1Q05722 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col9a1Q05722 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.79■□□□□ 0.92
Col9a1Q05722 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.79■□□□□ 0.92
Col9a1Q05722 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col9a1Q05722 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col9a1Q05722 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.78■□□□□ 0.92
Col9a1Q05722 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.78■□□□□ 0.92
Col9a1Q05722 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col9a1Q05722 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col9a1Q05722 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Col9a1Q05722 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.78■□□□□ 0.92
Col9a1Q05722 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.78■□□□□ 0.92
Col9a1Q05722 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.78■□□□□ 0.92
Col9a1Q05722 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col9a1Q05722 Gm4968-201ENSMUST00000071458 858 ntBASIC20.78■□□□□ 0.92
Col9a1Q05722 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col9a1Q05722 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col9a1Q05722 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col9a1Q05722 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col9a1Q05722 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col9a1Q05722 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.77■□□□□ 0.92
Col9a1Q05722 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col9a1Q05722 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.77■□□□□ 0.92
Col9a1Q05722 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col9a1Q05722 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col9a1Q05722 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col9a1Q05722 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Col9a1Q05722 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Col9a1Q05722 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Col9a1Q05722 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.76■□□□□ 0.91
Col9a1Q05722 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col9a1Q05722 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col9a1Q05722 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col9a1Q05722 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col9a1Q05722 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.75■□□□□ 0.91
Col9a1Q05722 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col9a1Q05722 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.75■□□□□ 0.91
Col9a1Q05722 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Col9a1Q05722 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.75■□□□□ 0.91
Col9a1Q05722 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Col9a1Q05722 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Col9a1Q05722 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Col9a1Q05722 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col9a1Q05722 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col9a1Q05722 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col9a1Q05722 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col9a1Q05722 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Col9a1Q05722 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col9a1Q05722 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col9a1Q05722 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col9a1Q05722 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Col9a1Q05722 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Col9a1Q05722 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col9a1Q05722 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col9a1Q05722 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a1Q05722 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a1Q05722 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a1Q05722 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.72■□□□□ 0.91
Col9a1Q05722 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.72■□□□□ 0.91
Col9a1Q05722 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.72■□□□□ 0.91
Col9a1Q05722 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.72■□□□□ 0.91
Col9a1Q05722 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Col9a1Q05722 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a1Q05722 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a1Q05722 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a1Q05722 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a1Q05722 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col9a1Q05722 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
Col9a1Q05722 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col9a1Q05722 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Col9a1Q05722 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col9a1Q05722 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Col9a1Q05722 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col9a1Q05722 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col9a1Q05722 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Col9a1Q05722 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.7■□□□□ 0.9
Col9a1Q05722 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col9a1Q05722 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.69■□□□□ 0.9
Col9a1Q05722 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.69■□□□□ 0.9
Col9a1Q05722 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.69■□□□□ 0.9
Col9a1Q05722 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col9a1Q05722 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col9a1Q05722 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Col9a1Q05722 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col9a1Q05722 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col9a1Q05722 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col9a1Q05722 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms