Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca2P97929 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca2P97929 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca2P97929 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca2P97929 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Brca2P97929 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca2P97929 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.51■□□□□ 0.87
Brca2P97929 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca2P97929 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Brca2P97929 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Brca2P97929 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Brca2P97929 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.5■□□□□ 0.87
Brca2P97929 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Brca2P97929 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brca2P97929 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brca2P97929 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Brca2P97929 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.5■□□□□ 0.87
Brca2P97929 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brca2P97929 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brca2P97929 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.49■□□□□ 0.87
Brca2P97929 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Brca2P97929 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.49■□□□□ 0.87
Brca2P97929 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Brca2P97929 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Brca2P97929 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Brca2P97929 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.48■□□□□ 0.87
Brca2P97929 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.48■□□□□ 0.87
Brca2P97929 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.48■□□□□ 0.87
Brca2P97929 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brca2P97929 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brca2P97929 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.48■□□□□ 0.87
Brca2P97929 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brca2P97929 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brca2P97929 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.48■□□□□ 0.87
Brca2P97929 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brca2P97929 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Brca2P97929 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Brca2P97929 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Brca2P97929 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.47■□□□□ 0.87
Brca2P97929 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.47■□□□□ 0.87
Brca2P97929 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.47■□□□□ 0.87
Brca2P97929 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.47■□□□□ 0.87
Brca2P97929 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Brca2P97929 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Brca2P97929 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Brca2P97929 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Brca2P97929 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Brca2P97929 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Brca2P97929 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Brca2P97929 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brca2P97929 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Brca2P97929 Gm10252-201ENSMUST00000209541 832 ntBASIC20.45■□□□□ 0.86
Brca2P97929 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Brca2P97929 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Brca2P97929 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.45■□□□□ 0.86
Brca2P97929 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.45■□□□□ 0.86
Brca2P97929 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Brca2P97929 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.45■□□□□ 0.86
Brca2P97929 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Brca2P97929 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Brca2P97929 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.45■□□□□ 0.86
Brca2P97929 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Brca2P97929 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Brca2P97929 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Brca2P97929 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Brca2P97929 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brca2P97929 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.42■□□□□ 0.86
Brca2P97929 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brca2P97929 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brca2P97929 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brca2P97929 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.42■□□□□ 0.86
Brca2P97929 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brca2P97929 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Brca2P97929 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brca2P97929 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brca2P97929 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brca2P97929 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Brca2P97929 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Brca2P97929 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Brca2P97929 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca2P97929 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca2P97929 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.4■□□□□ 0.86
Brca2P97929 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca2P97929 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca2P97929 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca2P97929 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.4■□□□□ 0.86
Brca2P97929 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Brca2P97929 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.4■□□□□ 0.86
Brca2P97929 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca2P97929 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca2P97929 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca2P97929 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Brca2P97929 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Brca2P97929 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Brca2P97929 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Brca2P97929 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Brca2P97929 Gm7977-201ENSMUST00000193787 748 ntBASIC20.39■□□□□ 0.86
Brca2P97929 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brca2P97929 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brca2P97929 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms