Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Smad4P97471 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smad4P97471 AV356131-201ENSMUST00000206201 750 ntBASIC21.22■□□□□ 0.99
Smad4P97471 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.22■□□□□ 0.99
Smad4P97471 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.22■□□□□ 0.99
Smad4P97471 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Smad4P97471 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smad4P97471 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smad4P97471 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smad4P97471 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smad4P97471 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smad4P97471 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.21■□□□□ 0.99
Smad4P97471 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.21■□□□□ 0.99
Smad4P97471 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.21■□□□□ 0.99
Smad4P97471 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Smad4P97471 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.21■□□□□ 0.99
Smad4P97471 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smad4P97471 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smad4P97471 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smad4P97471 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.99
Smad4P97471 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smad4P97471 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Smad4P97471 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.2■□□□□ 0.98
Smad4P97471 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
Smad4P97471 Gm10033-202ENSMUST00000211874 928 ntBASIC21.2■□□□□ 0.98
Smad4P97471 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
Smad4P97471 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smad4P97471 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smad4P97471 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smad4P97471 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.19■□□□□ 0.98
Smad4P97471 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.19■□□□□ 0.98
Smad4P97471 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smad4P97471 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smad4P97471 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smad4P97471 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smad4P97471 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smad4P97471 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smad4P97471 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smad4P97471 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.17■□□□□ 0.98
Smad4P97471 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.17■□□□□ 0.98
Smad4P97471 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Smad4P97471 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.17■□□□□ 0.98
Smad4P97471 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Smad4P97471 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smad4P97471 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smad4P97471 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smad4P97471 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.16■□□□□ 0.98
Smad4P97471 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smad4P97471 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.16■□□□□ 0.98
Smad4P97471 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smad4P97471 Gm10602-201ENSMUST00000098239 609 ntBASIC21.16■□□□□ 0.98
Smad4P97471 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smad4P97471 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smad4P97471 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smad4P97471 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smad4P97471 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Smad4P97471 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Smad4P97471 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smad4P97471 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smad4P97471 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smad4P97471 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smad4P97471 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.14■□□□□ 0.98
Smad4P97471 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smad4P97471 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smad4P97471 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smad4P97471 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.14■□□□□ 0.97
Smad4P97471 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smad4P97471 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad4P97471 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Smad4P97471 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.13■□□□□ 0.97
Smad4P97471 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smad4P97471 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad4P97471 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad4P97471 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad4P97471 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.13■□□□□ 0.97
Smad4P97471 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.13■□□□□ 0.97
Smad4P97471 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad4P97471 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad4P97471 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.13■□□□□ 0.97
Smad4P97471 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad4P97471 Smad6-203ENSMUST00000179458 273 ntBASIC21.12■□□□□ 0.97
Smad4P97471 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smad4P97471 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smad4P97471 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smad4P97471 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Smad4P97471 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.11■□□□□ 0.97
Smad4P97471 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smad4P97471 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smad4P97471 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smad4P97471 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smad4P97471 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smad4P97471 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smad4P97471 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Smad4P97471 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smad4P97471 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Smad4P97471 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smad4P97471 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smad4P97471 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.1■□□□□ 0.97
Smad4P97471 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smad4P97471 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms