Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Crnkl1P63154 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Crnkl1P63154 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Crnkl1P63154 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Crnkl1P63154 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.39■□□□□ 0.85
Crnkl1P63154 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Crnkl1P63154 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Crnkl1P63154 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Crnkl1P63154 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Crnkl1P63154 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Crnkl1P63154 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Crnkl1P63154 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Crnkl1P63154 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Crnkl1P63154 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Crnkl1P63154 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Crnkl1P63154 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Crnkl1P63154 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Crnkl1P63154 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.38■□□□□ 0.85
Crnkl1P63154 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Crnkl1P63154 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Crnkl1P63154 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Crnkl1P63154 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Crnkl1P63154 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Crnkl1P63154 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Crnkl1P63154 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Crnkl1P63154 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Crnkl1P63154 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.37■□□□□ 0.85
Crnkl1P63154 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Crnkl1P63154 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Crnkl1P63154 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Crnkl1P63154 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Crnkl1P63154 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Crnkl1P63154 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Crnkl1P63154 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Crnkl1P63154 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Crnkl1P63154 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.36■□□□□ 0.85
Crnkl1P63154 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Crnkl1P63154 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Crnkl1P63154 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Crnkl1P63154 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Crnkl1P63154 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.36■□□□□ 0.85
Crnkl1P63154 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.35■□□□□ 0.85
Crnkl1P63154 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Crnkl1P63154 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Crnkl1P63154 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Crnkl1P63154 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Crnkl1P63154 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Crnkl1P63154 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Crnkl1P63154 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Crnkl1P63154 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Crnkl1P63154 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Crnkl1P63154 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Crnkl1P63154 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Crnkl1P63154 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Crnkl1P63154 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Crnkl1P63154 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Crnkl1P63154 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.34■□□□□ 0.85
Crnkl1P63154 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Crnkl1P63154 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Crnkl1P63154 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.33■□□□□ 0.85
Crnkl1P63154 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Crnkl1P63154 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.33■□□□□ 0.84
Crnkl1P63154 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Crnkl1P63154 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.32■□□□□ 0.84
Crnkl1P63154 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.32■□□□□ 0.84
Crnkl1P63154 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Crnkl1P63154 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Crnkl1P63154 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Crnkl1P63154 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Crnkl1P63154 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Crnkl1P63154 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Crnkl1P63154 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Crnkl1P63154 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Crnkl1P63154 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.31■□□□□ 0.84
Crnkl1P63154 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Crnkl1P63154 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Crnkl1P63154 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Crnkl1P63154 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.31■□□□□ 0.84
Crnkl1P63154 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Crnkl1P63154 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Crnkl1P63154 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Crnkl1P63154 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Crnkl1P63154 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Crnkl1P63154 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Crnkl1P63154 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.3■□□□□ 0.84
Crnkl1P63154 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Crnkl1P63154 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Crnkl1P63154 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Crnkl1P63154 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Crnkl1P63154 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Crnkl1P63154 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.29■□□□□ 0.84
Crnkl1P63154 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Crnkl1P63154 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Crnkl1P63154 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Crnkl1P63154 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Crnkl1P63154 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Crnkl1P63154 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Crnkl1P63154 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Crnkl1P63154 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Crnkl1P63154 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms