Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nup43P59235 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Nup43P59235 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup43P59235 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nup43P59235 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nup43P59235 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.66■□□□□ 0.74
Nup43P59235 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup43P59235 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup43P59235 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup43P59235 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup43P59235 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Nup43P59235 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup43P59235 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup43P59235 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.65■□□□□ 0.74
Nup43P59235 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nup43P59235 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nup43P59235 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup43P59235 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.64■□□□□ 0.74
Nup43P59235 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nup43P59235 Rps24-207ENSMUST00000224568 714 ntBASIC19.64■□□□□ 0.73
Nup43P59235 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup43P59235 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup43P59235 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup43P59235 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup43P59235 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup43P59235 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.64■□□□□ 0.73
Nup43P59235 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup43P59235 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup43P59235 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nup43P59235 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup43P59235 Gm7417-201ENSMUST00000192950 473 ntBASIC19.63■□□□□ 0.73
Nup43P59235 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.63■□□□□ 0.73
Nup43P59235 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.63■□□□□ 0.73
Nup43P59235 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup43P59235 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.62■□□□□ 0.73
Nup43P59235 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.62■□□□□ 0.73
Nup43P59235 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup43P59235 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup43P59235 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup43P59235 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup43P59235 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Nup43P59235 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nup43P59235 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Nup43P59235 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.61■□□□□ 0.73
Nup43P59235 Gm45102-201ENSMUST00000207427 857 ntBASIC19.61■□□□□ 0.73
Nup43P59235 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup43P59235 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup43P59235 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nup43P59235 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup43P59235 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nup43P59235 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup43P59235 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup43P59235 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup43P59235 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup43P59235 Gm14117-201ENSMUST00000122417 843 ntBASIC19.6■□□□□ 0.73
Nup43P59235 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.6■□□□□ 0.73
Nup43P59235 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nup43P59235 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup43P59235 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Nup43P59235 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup43P59235 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Nup43P59235 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nup43P59235 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup43P59235 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.59■□□□□ 0.73
Nup43P59235 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup43P59235 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup43P59235 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.59■□□□□ 0.73
Nup43P59235 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup43P59235 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.58■□□□□ 0.73
Nup43P59235 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup43P59235 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.58■□□□□ 0.73
Nup43P59235 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.58■□□□□ 0.72
Nup43P59235 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nup43P59235 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nup43P59235 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nup43P59235 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nup43P59235 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.58■□□□□ 0.72
Nup43P59235 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup43P59235 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup43P59235 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup43P59235 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup43P59235 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nup43P59235 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup43P59235 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup43P59235 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup43P59235 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup43P59235 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup43P59235 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nup43P59235 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup43P59235 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup43P59235 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nup43P59235 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.56■□□□□ 0.72
Nup43P59235 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.56■□□□□ 0.72
Nup43P59235 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup43P59235 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nup43P59235 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Nup43P59235 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup43P59235 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup43P59235 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.56■□□□□ 0.72
Nup43P59235 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms