Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tpm1P58771 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tpm1P58771 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tpm1P58771 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Tpm1P58771 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Tpm1P58771 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
Tpm1P58771 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Tpm1P58771 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Tpm1P58771 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Tpm1P58771 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tpm1P58771 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Tpm1P58771 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tpm1P58771 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tpm1P58771 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tpm1P58771 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tpm1P58771 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Tpm1P58771 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tpm1P58771 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tpm1P58771 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tpm1P58771 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tpm1P58771 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC23.05■■□□□ 1.28
Tpm1P58771 Gm9806-201ENSMUST00000051080 552 ntBASIC23.05■■□□□ 1.28
Tpm1P58771 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tpm1P58771 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tpm1P58771 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tpm1P58771 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tpm1P58771 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Tpm1P58771 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Tpm1P58771 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tpm1P58771 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Tpm1P58771 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tpm1P58771 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tpm1P58771 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tpm1P58771 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tpm1P58771 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tpm1P58771 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tpm1P58771 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tpm1P58771 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Tpm1P58771 Scarna2-201ENSMUST00000157560 414 ntBASIC23.03■■□□□ 1.28
Tpm1P58771 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tpm1P58771 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.03■■□□□ 1.28
Tpm1P58771 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tpm1P58771 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tpm1P58771 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Tpm1P58771 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Tpm1P58771 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Tpm1P58771 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tpm1P58771 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tpm1P58771 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tpm1P58771 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Tpm1P58771 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tpm1P58771 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Tpm1P58771 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tpm1P58771 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Tpm1P58771 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tpm1P58771 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Tpm1P58771 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.01■■□□□ 1.27
Tpm1P58771 Gm16437-201ENSMUST00000025669 507 ntBASIC23.01■■□□□ 1.27
Tpm1P58771 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tpm1P58771 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tpm1P58771 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.01■■□□□ 1.27
Tpm1P58771 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Tpm1P58771 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Tpm1P58771 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Tpm1P58771 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Tpm1P58771 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Tpm1P58771 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Tpm1P58771 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tpm1P58771 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tpm1P58771 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.99■■□□□ 1.27
Tpm1P58771 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.99■■□□□ 1.27
Tpm1P58771 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tpm1P58771 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tpm1P58771 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.99■■□□□ 1.27
Tpm1P58771 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tpm1P58771 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.99■■□□□ 1.27
Tpm1P58771 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.98■■□□□ 1.27
Tpm1P58771 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.98■■□□□ 1.27
Tpm1P58771 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Tpm1P58771 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tpm1P58771 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Tpm1P58771 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tpm1P58771 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tpm1P58771 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tpm1P58771 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tpm1P58771 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Tpm1P58771 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.97■■□□□ 1.27
Tpm1P58771 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Tpm1P58771 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tpm1P58771 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Tpm1P58771 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tpm1P58771 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tpm1P58771 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.96■■□□□ 1.27
Tpm1P58771 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Tpm1P58771 Gm11687-201ENSMUST00000118911 886 ntBASIC22.96■■□□□ 1.27
Tpm1P58771 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tpm1P58771 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tpm1P58771 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tpm1P58771 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tpm1P58771 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms