Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cks2P56390 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cks2P56390 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cks2P56390 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.3■□□□□ 0.36
Cks2P56390 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cks2P56390 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cks2P56390 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cks2P56390 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cks2P56390 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cks2P56390 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cks2P56390 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cks2P56390 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.29■□□□□ 0.36
Cks2P56390 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cks2P56390 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cks2P56390 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.28■□□□□ 0.36
Cks2P56390 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cks2P56390 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cks2P56390 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cks2P56390 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cks2P56390 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cks2P56390 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.28■□□□□ 0.36
Cks2P56390 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cks2P56390 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cks2P56390 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cks2P56390 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.27■□□□□ 0.36
Cks2P56390 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cks2P56390 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cks2P56390 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cks2P56390 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cks2P56390 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cks2P56390 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.26■□□□□ 0.35
Cks2P56390 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cks2P56390 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cks2P56390 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cks2P56390 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.26■□□□□ 0.35
Cks2P56390 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.26■□□□□ 0.35
Cks2P56390 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cks2P56390 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cks2P56390 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cks2P56390 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cks2P56390 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cks2P56390 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Cks2P56390 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.25■□□□□ 0.35
Cks2P56390 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cks2P56390 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cks2P56390 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cks2P56390 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cks2P56390 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Cks2P56390 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cks2P56390 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Cks2P56390 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cks2P56390 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cks2P56390 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cks2P56390 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cks2P56390 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cks2P56390 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.24■□□□□ 0.35
Cks2P56390 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cks2P56390 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cks2P56390 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cks2P56390 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cks2P56390 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cks2P56390 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cks2P56390 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cks2P56390 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Cks2P56390 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cks2P56390 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cks2P56390 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cks2P56390 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cks2P56390 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cks2P56390 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cks2P56390 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cks2P56390 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cks2P56390 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cks2P56390 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cks2P56390 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cks2P56390 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cks2P56390 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.22■□□□□ 0.35
Cks2P56390 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cks2P56390 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cks2P56390 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Cks2P56390 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cks2P56390 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cks2P56390 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cks2P56390 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Cks2P56390 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.21■□□□□ 0.35
Cks2P56390 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cks2P56390 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cks2P56390 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.21■□□□□ 0.35
Cks2P56390 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cks2P56390 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cks2P56390 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Cks2P56390 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cks2P56390 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.21■□□□□ 0.35
Cks2P56390 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cks2P56390 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cks2P56390 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.21■□□□□ 0.35
Cks2P56390 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cks2P56390 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cks2P56390 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Cks2P56390 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms