Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Limk1P53668 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.41■□□□□ 0.86
Limk1P53668 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Limk1P53668 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.41■□□□□ 0.86
Limk1P53668 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Limk1P53668 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Limk1P53668 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Limk1P53668 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.4■□□□□ 0.86
Limk1P53668 Gm8493-201ENSMUST00000196881 489 ntBASIC20.4■□□□□ 0.86
Limk1P53668 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Limk1P53668 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Limk1P53668 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Limk1P53668 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Limk1P53668 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Limk1P53668 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Limk1P53668 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.39■□□□□ 0.85
Limk1P53668 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Limk1P53668 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Limk1P53668 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.38■□□□□ 0.85
Limk1P53668 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Limk1P53668 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Limk1P53668 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Limk1P53668 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.38■□□□□ 0.85
Limk1P53668 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.38■□□□□ 0.85
Limk1P53668 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Limk1P53668 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Limk1P53668 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Limk1P53668 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Limk1P53668 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Limk1P53668 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Limk1P53668 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Limk1P53668 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.37■□□□□ 0.85
Limk1P53668 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Limk1P53668 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Limk1P53668 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Limk1P53668 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.37■□□□□ 0.85
Limk1P53668 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Limk1P53668 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Limk1P53668 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Limk1P53668 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Limk1P53668 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Limk1P53668 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Limk1P53668 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Limk1P53668 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.36■□□□□ 0.85
Limk1P53668 Gm9870-201ENSMUST00000063874 645 ntBASIC20.36■□□□□ 0.85
Limk1P53668 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Limk1P53668 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.36■□□□□ 0.85
Limk1P53668 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Limk1P53668 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Limk1P53668 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Limk1P53668 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Limk1P53668 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Limk1P53668 Gm27405-201ENSMUST00000184201 112 ntBASIC20.35■□□□□ 0.85
Limk1P53668 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Limk1P53668 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Limk1P53668 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Limk1P53668 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Limk1P53668 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.34■□□□□ 0.85
Limk1P53668 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Limk1P53668 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Limk1P53668 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Limk1P53668 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Limk1P53668 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Limk1P53668 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Limk1P53668 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.33■□□□□ 0.85
Limk1P53668 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Limk1P53668 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Limk1P53668 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk1P53668 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk1P53668 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk1P53668 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Limk1P53668 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk1P53668 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk1P53668 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk1P53668 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Limk1P53668 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Limk1P53668 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Limk1P53668 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.31■□□□□ 0.84
Limk1P53668 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Limk1P53668 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Limk1P53668 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Limk1P53668 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Limk1P53668 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.3■□□□□ 0.84
Limk1P53668 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Limk1P53668 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Limk1P53668 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Limk1P53668 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Limk1P53668 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Limk1P53668 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.3■□□□□ 0.84
Limk1P53668 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.3■□□□□ 0.84
Limk1P53668 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Limk1P53668 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Limk1P53668 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Limk1P53668 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Limk1P53668 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Limk1P53668 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Limk1P53668 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Limk1P53668 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Limk1P53668 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Limk1P53668 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms