Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RoraP51448 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RoraP51448 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RoraP51448 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RoraP51448 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.63■□□□□ 0.73
RoraP51448 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.63■□□□□ 0.73
RoraP51448 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RoraP51448 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.63■□□□□ 0.73
RoraP51448 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RoraP51448 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RoraP51448 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RoraP51448 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.62■□□□□ 0.73
RoraP51448 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RoraP51448 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
RoraP51448 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RoraP51448 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RoraP51448 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RoraP51448 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RoraP51448 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RoraP51448 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.61■□□□□ 0.73
RoraP51448 Golgb1-201ENSMUST00000023534 498 ntBASIC19.61■□□□□ 0.73
RoraP51448 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RoraP51448 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RoraP51448 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.61■□□□□ 0.73
RoraP51448 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RoraP51448 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RoraP51448 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RoraP51448 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RoraP51448 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RoraP51448 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RoraP51448 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RoraP51448 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.6■□□□□ 0.73
RoraP51448 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RoraP51448 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RoraP51448 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RoraP51448 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RoraP51448 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.59■□□□□ 0.73
RoraP51448 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.59■□□□□ 0.73
RoraP51448 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RoraP51448 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RoraP51448 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RoraP51448 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RoraP51448 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RoraP51448 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RoraP51448 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RoraP51448 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RoraP51448 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.58■□□□□ 0.72
RoraP51448 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.58■□□□□ 0.72
RoraP51448 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.58■□□□□ 0.72
RoraP51448 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
RoraP51448 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RoraP51448 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RoraP51448 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.58■□□□□ 0.72
RoraP51448 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RoraP51448 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RoraP51448 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RoraP51448 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.58■□□□□ 0.72
RoraP51448 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RoraP51448 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RoraP51448 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RoraP51448 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RoraP51448 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.57■□□□□ 0.72
RoraP51448 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RoraP51448 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RoraP51448 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RoraP51448 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RoraP51448 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RoraP51448 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RoraP51448 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RoraP51448 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RoraP51448 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RoraP51448 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.56■□□□□ 0.72
RoraP51448 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RoraP51448 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RoraP51448 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.56■□□□□ 0.72
RoraP51448 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
RoraP51448 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.56■□□□□ 0.72
RoraP51448 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RoraP51448 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.55■□□□□ 0.72
RoraP51448 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
RoraP51448 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RoraP51448 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.55■□□□□ 0.72
RoraP51448 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.55■□□□□ 0.72
RoraP51448 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.55■□□□□ 0.72
RoraP51448 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RoraP51448 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
RoraP51448 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RoraP51448 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RoraP51448 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RoraP51448 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
RoraP51448 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RoraP51448 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RoraP51448 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RoraP51448 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RoraP51448 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
RoraP51448 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RoraP51448 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RoraP51448 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RoraP51448 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RoraP51448 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms