Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prox1P48437 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prox1P48437 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prox1P48437 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prox1P48437 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prox1P48437 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Prox1P48437 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prox1P48437 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Prox1P48437 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.81■□□□□ 0.76
Prox1P48437 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prox1P48437 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prox1P48437 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prox1P48437 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prox1P48437 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Prox1P48437 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Prox1P48437 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Prox1P48437 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Prox1P48437 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prox1P48437 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prox1P48437 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prox1P48437 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prox1P48437 Golph3-202ENSMUST00000226517 2359 ntBASIC19.79■□□□□ 0.76
Prox1P48437 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prox1P48437 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prox1P48437 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prox1P48437 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Prox1P48437 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prox1P48437 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prox1P48437 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prox1P48437 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prox1P48437 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prox1P48437 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prox1P48437 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prox1P48437 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prox1P48437 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prox1P48437 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prox1P48437 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prox1P48437 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Prox1P48437 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prox1P48437 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prox1P48437 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Prox1P48437 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Prox1P48437 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prox1P48437 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prox1P48437 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prox1P48437 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.76■□□□□ 0.75
Prox1P48437 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.76■□□□□ 0.75
Prox1P48437 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Prox1P48437 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prox1P48437 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prox1P48437 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.75■□□□□ 0.75
Prox1P48437 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prox1P48437 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prox1P48437 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prox1P48437 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prox1P48437 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prox1P48437 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prox1P48437 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prox1P48437 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prox1P48437 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prox1P48437 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Prox1P48437 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prox1P48437 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Prox1P48437 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prox1P48437 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Prox1P48437 Cap2-205ENSMUST00000225824 1634 ntBASIC19.73■□□□□ 0.75
Prox1P48437 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.73■□□□□ 0.75
Prox1P48437 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prox1P48437 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Prox1P48437 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prox1P48437 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prox1P48437 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prox1P48437 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prox1P48437 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.72■□□□□ 0.75
Prox1P48437 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prox1P48437 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prox1P48437 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prox1P48437 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prox1P48437 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Prox1P48437 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prox1P48437 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prox1P48437 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prox1P48437 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prox1P48437 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prox1P48437 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prox1P48437 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prox1P48437 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prox1P48437 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Prox1P48437 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.7■□□□□ 0.74
Prox1P48437 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prox1P48437 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Prox1P48437 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prox1P48437 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prox1P48437 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prox1P48437 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Prox1P48437 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Prox1P48437 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prox1P48437 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.69■□□□□ 0.74
Prox1P48437 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prox1P48437 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms