Protein–RNA interactions for Protein: P47741

Tnfrsf4, Tumor necrosis factor receptor superfamily member 4, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf4P47741 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf4P47741 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Tnfrsf4P47741 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf4P47741 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf4P47741 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf4P47741 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Tnfrsf4P47741 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf4P47741 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.13■□□□□ 0.97
Tnfrsf4P47741 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf4P47741 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf4P47741 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf4P47741 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf4P47741 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf4P47741 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf4P47741 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf4P47741 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf4P47741 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf4P47741 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf4P47741 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf4P47741 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf4P47741 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf4P47741 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf4P47741 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf4P47741 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf4P47741 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Tnfrsf4P47741 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf4P47741 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.11■□□□□ 0.97
Tnfrsf4P47741 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf4P47741 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf4P47741 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf4P47741 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Tnfrsf4P47741 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf4P47741 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Tnfrsf4P47741 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf4P47741 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf4P47741 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.1■□□□□ 0.97
Tnfrsf4P47741 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf4P47741 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf4P47741 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf4P47741 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf4P47741 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf4P47741 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf4P47741 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf4P47741 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.08■□□□□ 0.97
Tnfrsf4P47741 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Tnfrsf4P47741 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.08■□□□□ 0.97
Tnfrsf4P47741 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.08■□□□□ 0.97
Tnfrsf4P47741 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Tnfrsf4P47741 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Tnfrsf4P47741 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.07■□□□□ 0.96
Tnfrsf4P47741 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf4P47741 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.07■□□□□ 0.96
Tnfrsf4P47741 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf4P47741 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.06■□□□□ 0.96
Tnfrsf4P47741 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf4P47741 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Tnfrsf4P47741 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf4P47741 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf4P47741 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf4P47741 Gm12251-201ENSMUST00000117893 792 ntBASIC21.05■□□□□ 0.96
Tnfrsf4P47741 Gm43530-201ENSMUST00000195920 274 ntBASIC21.05■□□□□ 0.96
Tnfrsf4P47741 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf4P47741 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf4P47741 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf4P47741 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf4P47741 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf4P47741 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.04■□□□□ 0.96
Tnfrsf4P47741 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf4P47741 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf4P47741 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.04■□□□□ 0.96
Tnfrsf4P47741 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf4P47741 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Tnfrsf4P47741 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf4P47741 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Tnfrsf4P47741 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf4P47741 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Tnfrsf4P47741 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf4P47741 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf4P47741 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.03■□□□□ 0.96
Tnfrsf4P47741 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
Tnfrsf4P47741 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf4P47741 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf4P47741 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.03■□□□□ 0.96
Tnfrsf4P47741 Gm26833-201ENSMUST00000180899 440 ntBASIC21.02■□□□□ 0.96
Tnfrsf4P47741 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Tnfrsf4P47741 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Tnfrsf4P47741 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf4P47741 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.01■□□□□ 0.95
Tnfrsf4P47741 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf4P47741 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Tnfrsf4P47741 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf4P47741 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf4P47741 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf4P47741 Spcs1-204ENSMUST00000226782 949 ntBASIC21.01■□□□□ 0.95
Tnfrsf4P47741 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf4P47741 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf4P47741 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf4P47741 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf4P47741 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfrsf4P47741 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms