Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20■□□□□ 0.79
Sox18P43680 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sox18P43680 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20■□□□□ 0.79
Sox18P43680 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox18P43680 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox18P43680 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Sox18P43680 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox18P43680 Gm37179-201ENSMUST00000194862 823 ntBASIC19.99■□□□□ 0.79
Sox18P43680 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.99■□□□□ 0.79
Sox18P43680 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Sox18P43680 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox18P43680 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox18P43680 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox18P43680 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Sox18P43680 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox18P43680 Gm10493-201ENSMUST00000097270 612 ntBASIC19.98■□□□□ 0.79
Sox18P43680 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox18P43680 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox18P43680 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox18P43680 Gm10849-201ENSMUST00000100397 618 ntBASIC19.97■□□□□ 0.79
Sox18P43680 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.97■□□□□ 0.79
Sox18P43680 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.97■□□□□ 0.79
Sox18P43680 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Sox18P43680 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox18P43680 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Sox18P43680 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sox18P43680 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox18P43680 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Sox18P43680 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sox18P43680 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
Sox18P43680 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox18P43680 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox18P43680 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
Sox18P43680 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.96■□□□□ 0.79
Sox18P43680 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox18P43680 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox18P43680 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.95■□□□□ 0.78
Sox18P43680 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox18P43680 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox18P43680 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Sox18P43680 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.95■□□□□ 0.78
Sox18P43680 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox18P43680 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox18P43680 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Sox18P43680 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox18P43680 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox18P43680 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox18P43680 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sox18P43680 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox18P43680 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox18P43680 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox18P43680 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox18P43680 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox18P43680 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox18P43680 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox18P43680 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Sox18P43680 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox18P43680 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox18P43680 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox18P43680 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.92■□□□□ 0.78
Sox18P43680 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox18P43680 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.92■□□□□ 0.78
Sox18P43680 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.92■□□□□ 0.78
Sox18P43680 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox18P43680 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.92■□□□□ 0.78
Sox18P43680 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Sox18P43680 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox18P43680 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox18P43680 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox18P43680 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.92■□□□□ 0.78
Sox18P43680 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
Sox18P43680 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox18P43680 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox18P43680 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.91■□□□□ 0.78
Sox18P43680 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Sox18P43680 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox18P43680 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox18P43680 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox18P43680 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.9■□□□□ 0.78
Sox18P43680 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sox18P43680 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox18P43680 Gm42642-201ENSMUST00000200683 355 ntBASIC19.9■□□□□ 0.78
Sox18P43680 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Sox18P43680 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Sox18P43680 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.89■□□□□ 0.77
Sox18P43680 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox18P43680 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox18P43680 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox18P43680 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox18P43680 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox18P43680 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Sox18P43680 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox18P43680 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox18P43680 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox18P43680 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sox18P43680 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.87■□□□□ 0.77
Sox18P43680 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.87■□□□□ 0.77
Sox18P43680 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.87■□□□□ 0.77
Sox18P43680 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.87■□□□□ 0.77
Sox18P43680 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms