Protein–RNA interactions for Protein: P35980

Rpl18, 60S ribosomal protein L18, mousemouse

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl18P35980 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpl18P35980 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpl18P35980 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpl18P35980 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpl18P35980 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpl18P35980 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.69■□□□□ 0.58
Rpl18P35980 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpl18P35980 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rpl18P35980 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpl18P35980 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpl18P35980 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.69■□□□□ 0.58
Rpl18P35980 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpl18P35980 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rpl18P35980 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rpl18P35980 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpl18P35980 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpl18P35980 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rpl18P35980 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpl18P35980 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpl18P35980 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpl18P35980 Cap2-205ENSMUST00000225824 1634 ntBASIC18.68■□□□□ 0.58
Rpl18P35980 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpl18P35980 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rpl18P35980 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpl18P35980 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpl18P35980 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.67■□□□□ 0.58
Rpl18P35980 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl18P35980 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl18P35980 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl18P35980 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl18P35980 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
Rpl18P35980 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.67■□□□□ 0.58
Rpl18P35980 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rpl18P35980 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpl18P35980 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpl18P35980 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpl18P35980 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rpl18P35980 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpl18P35980 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rpl18P35980 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpl18P35980 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Rpl18P35980 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpl18P35980 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl18P35980 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rpl18P35980 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Rpl18P35980 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl18P35980 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rpl18P35980 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.65■□□□□ 0.58
Rpl18P35980 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl18P35980 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rpl18P35980 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl18P35980 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl18P35980 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpl18P35980 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rpl18P35980 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rpl18P35980 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpl18P35980 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.64■□□□□ 0.57
Rpl18P35980 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.64■□□□□ 0.57
Rpl18P35980 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpl18P35980 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpl18P35980 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.64■□□□□ 0.57
Rpl18P35980 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpl18P35980 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpl18P35980 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpl18P35980 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpl18P35980 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpl18P35980 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpl18P35980 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpl18P35980 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl18P35980 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.63■□□□□ 0.57
Rpl18P35980 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rpl18P35980 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl18P35980 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl18P35980 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl18P35980 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl18P35980 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl18P35980 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl18P35980 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpl18P35980 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl18P35980 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl18P35980 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl18P35980 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl18P35980 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.62■□□□□ 0.57
Rpl18P35980 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl18P35980 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rpl18P35980 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl18P35980 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl18P35980 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpl18P35980 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl18P35980 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.61■□□□□ 0.57
Rpl18P35980 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl18P35980 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.61■□□□□ 0.57
Rpl18P35980 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.61■□□□□ 0.57
Rpl18P35980 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl18P35980 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Rpl18P35980 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpl18P35980 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpl18P35980 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpl18P35980 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpl18P35980 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms