Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab3dP35276 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab3dP35276 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.31■□□□□ 0.36
Rab3dP35276 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab3dP35276 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab3dP35276 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab3dP35276 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab3dP35276 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rab3dP35276 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab3dP35276 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.3■□□□□ 0.36
Rab3dP35276 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.3■□□□□ 0.36
Rab3dP35276 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab3dP35276 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rab3dP35276 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab3dP35276 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab3dP35276 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab3dP35276 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab3dP35276 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rab3dP35276 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab3dP35276 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.29■□□□□ 0.36
Rab3dP35276 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab3dP35276 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab3dP35276 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab3dP35276 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rab3dP35276 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab3dP35276 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab3dP35276 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab3dP35276 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rab3dP35276 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab3dP35276 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab3dP35276 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab3dP35276 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab3dP35276 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab3dP35276 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab3dP35276 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab3dP35276 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab3dP35276 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rab3dP35276 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab3dP35276 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab3dP35276 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab3dP35276 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab3dP35276 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rab3dP35276 Iqck-206ENSMUST00000208658 2891 ntBASIC17.27■□□□□ 0.36
Rab3dP35276 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rab3dP35276 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rab3dP35276 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.27■□□□□ 0.36
Rab3dP35276 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab3dP35276 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Rab3dP35276 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rab3dP35276 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rab3dP35276 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab3dP35276 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab3dP35276 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab3dP35276 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab3dP35276 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab3dP35276 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab3dP35276 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab3dP35276 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab3dP35276 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rab3dP35276 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab3dP35276 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab3dP35276 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rab3dP35276 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab3dP35276 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rab3dP35276 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rab3dP35276 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rab3dP35276 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rab3dP35276 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.25■□□□□ 0.35
Rab3dP35276 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rab3dP35276 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab3dP35276 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab3dP35276 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.25■□□□□ 0.35
Rab3dP35276 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab3dP35276 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rab3dP35276 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab3dP35276 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Rab3dP35276 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab3dP35276 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Rab3dP35276 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rab3dP35276 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab3dP35276 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab3dP35276 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab3dP35276 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rab3dP35276 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab3dP35276 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab3dP35276 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab3dP35276 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rab3dP35276 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab3dP35276 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab3dP35276 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab3dP35276 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rab3dP35276 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab3dP35276 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.23■□□□□ 0.35
Rab3dP35276 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab3dP35276 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab3dP35276 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.23■□□□□ 0.35
Rab3dP35276 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab3dP35276 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rab3dP35276 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rab3dP35276 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms