Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp13P33435 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.21■□□□□ 0.99
Mmp13P33435 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Mmp13P33435 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Mmp13P33435 Gm45444-201ENSMUST00000211394 898 ntBASIC21.21■□□□□ 0.99
Mmp13P33435 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp13P33435 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp13P33435 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Mmp13P33435 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mmp13P33435 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Mmp13P33435 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mmp13P33435 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.2■□□□□ 0.98
Mmp13P33435 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Mmp13P33435 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mmp13P33435 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mmp13P33435 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mmp13P33435 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mmp13P33435 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp13P33435 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Mmp13P33435 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Mmp13P33435 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp13P33435 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp13P33435 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp13P33435 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.18■□□□□ 0.98
Mmp13P33435 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Mmp13P33435 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp13P33435 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp13P33435 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Mmp13P33435 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mmp13P33435 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.17■□□□□ 0.98
Mmp13P33435 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Mmp13P33435 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Mmp13P33435 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mmp13P33435 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
Mmp13P33435 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp13P33435 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp13P33435 Gm43566-201ENSMUST00000196851 808 ntBASIC21.16■□□□□ 0.98
Mmp13P33435 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp13P33435 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp13P33435 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.16■□□□□ 0.98
Mmp13P33435 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp13P33435 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Mmp13P33435 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.15■□□□□ 0.98
Mmp13P33435 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
Mmp13P33435 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.15■□□□□ 0.98
Mmp13P33435 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.15■□□□□ 0.98
Mmp13P33435 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mmp13P33435 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mmp13P33435 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mmp13P33435 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Mmp13P33435 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Mmp13P33435 Gm13238-201ENSMUST00000117655 780 ntBASIC21.14■□□□□ 0.97
Mmp13P33435 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Mmp13P33435 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Mmp13P33435 Gm5812-201ENSMUST00000061073 957 ntBASIC21.14■□□□□ 0.97
Mmp13P33435 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Mmp13P33435 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Mmp13P33435 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Mmp13P33435 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.13■□□□□ 0.97
Mmp13P33435 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mmp13P33435 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Mmp13P33435 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mmp13P33435 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp13P33435 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp13P33435 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.12■□□□□ 0.97
Mmp13P33435 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp13P33435 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Mmp13P33435 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp13P33435 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp13P33435 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp13P33435 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Mmp13P33435 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Mmp13P33435 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp13P33435 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp13P33435 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Mmp13P33435 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Mmp13P33435 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp13P33435 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp13P33435 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp13P33435 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Mmp13P33435 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp13P33435 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp13P33435 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.1■□□□□ 0.97
Mmp13P33435 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Mmp13P33435 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp13P33435 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.1■□□□□ 0.97
Mmp13P33435 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp13P33435 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.09■□□□□ 0.97
Mmp13P33435 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp13P33435 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp13P33435 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp13P33435 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp13P33435 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp13P33435 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp13P33435 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp13P33435 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.08■□□□□ 0.97
Mmp13P33435 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.08■□□□□ 0.97
Mmp13P33435 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp13P33435 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Mmp13P33435 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms