Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nedd8P29595 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd8P29595 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd8P29595 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd8P29595 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd8P29595 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd8P29595 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd8P29595 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd8P29595 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd8P29595 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd8P29595 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd8P29595 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd8P29595 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd8P29595 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Nedd8P29595 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.16■□□□□ 0.66
Nedd8P29595 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Nedd8P29595 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nedd8P29595 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.15■□□□□ 0.66
Nedd8P29595 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd8P29595 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd8P29595 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.15■□□□□ 0.66
Nedd8P29595 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.15■□□□□ 0.66
Nedd8P29595 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd8P29595 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd8P29595 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nedd8P29595 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Nedd8P29595 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nedd8P29595 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nedd8P29595 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nedd8P29595 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nedd8P29595 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nedd8P29595 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.14■□□□□ 0.65
Nedd8P29595 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nedd8P29595 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd8P29595 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd8P29595 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd8P29595 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Nedd8P29595 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Nedd8P29595 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.13■□□□□ 0.65
Nedd8P29595 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.13■□□□□ 0.65
Nedd8P29595 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nedd8P29595 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd8P29595 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Nedd8P29595 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd8P29595 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd8P29595 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Nedd8P29595 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd8P29595 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd8P29595 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd8P29595 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.12■□□□□ 0.65
Nedd8P29595 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Nedd8P29595 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Nedd8P29595 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd8P29595 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Nedd8P29595 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nedd8P29595 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nedd8P29595 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nedd8P29595 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nedd8P29595 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Nedd8P29595 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nedd8P29595 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.11■□□□□ 0.65
Nedd8P29595 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nedd8P29595 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nedd8P29595 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nedd8P29595 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nedd8P29595 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.1■□□□□ 0.65
Nedd8P29595 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nedd8P29595 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nedd8P29595 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nedd8P29595 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nedd8P29595 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Nedd8P29595 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nedd8P29595 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nedd8P29595 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nedd8P29595 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nedd8P29595 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nedd8P29595 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.08■□□□□ 0.65
Nedd8P29595 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nedd8P29595 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Nedd8P29595 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nedd8P29595 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nedd8P29595 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.08■□□□□ 0.64
Nedd8P29595 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Nedd8P29595 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Nedd8P29595 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nedd8P29595 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.08■□□□□ 0.64
Nedd8P29595 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nedd8P29595 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nedd8P29595 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Nedd8P29595 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nedd8P29595 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.07■□□□□ 0.64
Nedd8P29595 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Nedd8P29595 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nedd8P29595 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nedd8P29595 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.07■□□□□ 0.64
Nedd8P29595 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nedd8P29595 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.07■□□□□ 0.64
Nedd8P29595 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nedd8P29595 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nedd8P29595 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms