Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.68■□□□□ 0.9
Nckap1P28660 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nckap1P28660 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nckap1P28660 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nckap1P28660 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nckap1P28660 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nckap1P28660 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.67■□□□□ 0.9
Nckap1P28660 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nckap1P28660 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nckap1P28660 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nckap1P28660 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nckap1P28660 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nckap1P28660 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.66■□□□□ 0.9
Nckap1P28660 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.66■□□□□ 0.9
Nckap1P28660 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nckap1P28660 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nckap1P28660 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
Nckap1P28660 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.66■□□□□ 0.9
Nckap1P28660 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nckap1P28660 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.66■□□□□ 0.9
Nckap1P28660 Gm45417-201ENSMUST00000209533 758 ntBASIC20.66■□□□□ 0.9
Nckap1P28660 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.66■□□□□ 0.9
Nckap1P28660 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nckap1P28660 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nckap1P28660 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nckap1P28660 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nckap1P28660 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nckap1P28660 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nckap1P28660 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Nckap1P28660 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nckap1P28660 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nckap1P28660 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.65■□□□□ 0.9
Nckap1P28660 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nckap1P28660 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nckap1P28660 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nckap1P28660 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nckap1P28660 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nckap1P28660 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Nckap1P28660 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nckap1P28660 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nckap1P28660 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nckap1P28660 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Nckap1P28660 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nckap1P28660 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nckap1P28660 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nckap1P28660 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nckap1P28660 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nckap1P28660 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nckap1P28660 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nckap1P28660 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
Nckap1P28660 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nckap1P28660 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.63■□□□□ 0.89
Nckap1P28660 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nckap1P28660 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nckap1P28660 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nckap1P28660 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
Nckap1P28660 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nckap1P28660 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nckap1P28660 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nckap1P28660 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nckap1P28660 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nckap1P28660 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nckap1P28660 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nckap1P28660 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nckap1P28660 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nckap1P28660 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Nckap1P28660 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nckap1P28660 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nckap1P28660 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nckap1P28660 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Nckap1P28660 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.61■□□□□ 0.89
Nckap1P28660 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nckap1P28660 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nckap1P28660 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nckap1P28660 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nckap1P28660 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nckap1P28660 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Nckap1P28660 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nckap1P28660 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nckap1P28660 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.59■□□□□ 0.89
Nckap1P28660 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Nckap1P28660 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.59■□□□□ 0.89
Nckap1P28660 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nckap1P28660 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nckap1P28660 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nckap1P28660 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nckap1P28660 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nckap1P28660 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
Nckap1P28660 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.58■□□□□ 0.89
Nckap1P28660 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Nckap1P28660 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nckap1P28660 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nckap1P28660 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nckap1P28660 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.57■□□□□ 0.88
Nckap1P28660 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nckap1P28660 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.57■□□□□ 0.88
Nckap1P28660 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nckap1P28660 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nckap1P28660 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nckap1P28660 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms