Protein–RNA interactions for Protein: P08046

Egr1, Early growth response protein 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Egr1P08046 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Egr1P08046 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Egr1P08046 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Egr1P08046 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.63■□□□□ 0.73
Egr1P08046 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.63■□□□□ 0.73
Egr1P08046 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.62■□□□□ 0.73
Egr1P08046 Mir7071-201ENSMUST00000184847 69 ntBASIC19.62■□□□□ 0.73
Egr1P08046 Gm10252-201ENSMUST00000209541 832 ntBASIC19.62■□□□□ 0.73
Egr1P08046 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Egr1P08046 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Egr1P08046 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Egr1P08046 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Egr1P08046 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Egr1P08046 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.61■□□□□ 0.73
Egr1P08046 Gm10653-202ENSMUST00000139570 835 ntBASIC19.61■□□□□ 0.73
Egr1P08046 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Egr1P08046 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Egr1P08046 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Egr1P08046 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Egr1P08046 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Egr1P08046 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Egr1P08046 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Egr1P08046 Gm42778-201ENSMUST00000199644 553 ntBASIC19.6■□□□□ 0.73
Egr1P08046 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.59■□□□□ 0.73
Egr1P08046 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.59■□□□□ 0.73
Egr1P08046 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Egr1P08046 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
Egr1P08046 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Egr1P08046 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Egr1P08046 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.59■□□□□ 0.73
Egr1P08046 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Egr1P08046 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Egr1P08046 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Egr1P08046 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Egr1P08046 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Egr1P08046 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Egr1P08046 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Egr1P08046 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.58■□□□□ 0.72
Egr1P08046 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Egr1P08046 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Egr1P08046 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Egr1P08046 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Egr1P08046 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Egr1P08046 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Egr1P08046 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Egr1P08046 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.57■□□□□ 0.72
Egr1P08046 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Egr1P08046 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Egr1P08046 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Egr1P08046 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Egr1P08046 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.56■□□□□ 0.72
Egr1P08046 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Egr1P08046 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.56■□□□□ 0.72
Egr1P08046 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Egr1P08046 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.56■□□□□ 0.72
Egr1P08046 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Egr1P08046 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Egr1P08046 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Egr1P08046 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Egr1P08046 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Egr1P08046 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Egr1P08046 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Egr1P08046 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Egr1P08046 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.55■□□□□ 0.72
Egr1P08046 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.55■□□□□ 0.72
Egr1P08046 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Egr1P08046 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Egr1P08046 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Egr1P08046 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Egr1P08046 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.55■□□□□ 0.72
Egr1P08046 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Egr1P08046 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.54■□□□□ 0.72
Egr1P08046 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Egr1P08046 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Egr1P08046 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Egr1P08046 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Egr1P08046 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Egr1P08046 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Egr1P08046 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.53■□□□□ 0.72
Egr1P08046 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.53■□□□□ 0.72
Egr1P08046 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.53■□□□□ 0.72
Egr1P08046 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.53■□□□□ 0.72
Egr1P08046 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Egr1P08046 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Egr1P08046 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Egr1P08046 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Egr1P08046 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.52■□□□□ 0.72
Egr1P08046 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.52■□□□□ 0.72
Egr1P08046 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Egr1P08046 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Egr1P08046 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Egr1P08046 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Egr1P08046 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Egr1P08046 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.51■□□□□ 0.71
Egr1P08046 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Egr1P08046 Gm12933-201ENSMUST00000120203 872 ntBASIC19.51■□□□□ 0.71
Egr1P08046 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Egr1P08046 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Egr1P08046 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Egr1P08046 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms