Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PrnpP04925 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PrnpP04925 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PrnpP04925 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
PrnpP04925 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PrnpP04925 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PrnpP04925 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PrnpP04925 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PrnpP04925 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.77■■□□□ 1.08
PrnpP04925 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PrnpP04925 Gm8493-201ENSMUST00000196881 489 ntBASIC21.77■■□□□ 1.08
PrnpP04925 Gm43017-201ENSMUST00000198296 752 ntBASIC21.77■■□□□ 1.08
PrnpP04925 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.77■■□□□ 1.08
PrnpP04925 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PrnpP04925 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.77■■□□□ 1.08
PrnpP04925 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PrnpP04925 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PrnpP04925 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PrnpP04925 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
PrnpP04925 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PrnpP04925 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PrnpP04925 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PrnpP04925 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PrnpP04925 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PrnpP04925 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.76■■□□□ 1.07
PrnpP04925 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
PrnpP04925 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.76■■□□□ 1.07
PrnpP04925 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PrnpP04925 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PrnpP04925 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PrnpP04925 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PrnpP04925 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PrnpP04925 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PrnpP04925 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PrnpP04925 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PrnpP04925 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PrnpP04925 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PrnpP04925 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PrnpP04925 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PrnpP04925 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PrnpP04925 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PrnpP04925 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PrnpP04925 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.72■■□□□ 1.07
PrnpP04925 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PrnpP04925 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PrnpP04925 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PrnpP04925 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PrnpP04925 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PrnpP04925 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PrnpP04925 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.71■■□□□ 1.07
PrnpP04925 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PrnpP04925 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PrnpP04925 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PrnpP04925 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PrnpP04925 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PrnpP04925 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
PrnpP04925 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
PrnpP04925 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PrnpP04925 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PrnpP04925 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PrnpP04925 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PrnpP04925 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PrnpP04925 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PrnpP04925 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PrnpP04925 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.69■■□□□ 1.06
PrnpP04925 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PrnpP04925 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PrnpP04925 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PrnpP04925 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PrnpP04925 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PrnpP04925 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.68■■□□□ 1.06
PrnpP04925 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.68■■□□□ 1.06
PrnpP04925 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PrnpP04925 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PrnpP04925 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PrnpP04925 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PrnpP04925 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.68■■□□□ 1.06
PrnpP04925 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PrnpP04925 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PrnpP04925 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PrnpP04925 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
PrnpP04925 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PrnpP04925 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PrnpP04925 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.67■■□□□ 1.06
PrnpP04925 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.67■■□□□ 1.06
PrnpP04925 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
PrnpP04925 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.66■■□□□ 1.06
PrnpP04925 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PrnpP04925 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.66■■□□□ 1.06
PrnpP04925 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PrnpP04925 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PrnpP04925 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PrnpP04925 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PrnpP04925 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PrnpP04925 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PrnpP04925 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PrnpP04925 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.65■■□□□ 1.06
PrnpP04925 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.65■■□□□ 1.06
PrnpP04925 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PrnpP04925 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms