Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn3O88705 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn3O88705 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn3O88705 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.84■□□□□ 0.77
Hcn3O88705 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn3O88705 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn3O88705 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn3O88705 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.84■□□□□ 0.77
Hcn3O88705 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn3O88705 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcn3O88705 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hcn3O88705 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hcn3O88705 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Hcn3O88705 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hcn3O88705 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hcn3O88705 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn3O88705 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn3O88705 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn3O88705 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcn3O88705 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hcn3O88705 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.82■□□□□ 0.76
Hcn3O88705 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hcn3O88705 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hcn3O88705 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Hcn3O88705 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hcn3O88705 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hcn3O88705 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hcn3O88705 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hcn3O88705 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hcn3O88705 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hcn3O88705 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hcn3O88705 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hcn3O88705 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hcn3O88705 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hcn3O88705 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Hcn3O88705 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.79■□□□□ 0.76
Hcn3O88705 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hcn3O88705 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Hcn3O88705 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Hcn3O88705 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hcn3O88705 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.79■□□□□ 0.76
Hcn3O88705 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hcn3O88705 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hcn3O88705 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hcn3O88705 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hcn3O88705 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.79■□□□□ 0.76
Hcn3O88705 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Hcn3O88705 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.78■□□□□ 0.76
Hcn3O88705 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn3O88705 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn3O88705 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn3O88705 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Hcn3O88705 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn3O88705 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn3O88705 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn3O88705 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn3O88705 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn3O88705 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcn3O88705 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hcn3O88705 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.77■□□□□ 0.76
Hcn3O88705 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hcn3O88705 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Hcn3O88705 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.77■□□□□ 0.76
Hcn3O88705 Gm44428-201ENSMUST00000204474 874 ntBASIC19.77■□□□□ 0.76
Hcn3O88705 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.77■□□□□ 0.76
Hcn3O88705 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hcn3O88705 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hcn3O88705 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.77■□□□□ 0.75
Hcn3O88705 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hcn3O88705 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hcn3O88705 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.77■□□□□ 0.75
Hcn3O88705 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Hcn3O88705 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
Hcn3O88705 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn3O88705 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn3O88705 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn3O88705 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn3O88705 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn3O88705 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn3O88705 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.76■□□□□ 0.75
Hcn3O88705 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn3O88705 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.76■□□□□ 0.75
Hcn3O88705 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn3O88705 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn3O88705 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn3O88705 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hcn3O88705 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hcn3O88705 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hcn3O88705 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hcn3O88705 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hcn3O88705 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hcn3O88705 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hcn3O88705 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hcn3O88705 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hcn3O88705 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hcn3O88705 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hcn3O88705 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hcn3O88705 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcn3O88705 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcn3O88705 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms