Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops4O88544 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.09■□□□□ 0.65
Cops4O88544 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops4O88544 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops4O88544 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cops4O88544 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Cops4O88544 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops4O88544 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops4O88544 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Cops4O88544 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops4O88544 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Cops4O88544 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops4O88544 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops4O88544 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops4O88544 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops4O88544 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops4O88544 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops4O88544 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cops4O88544 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cops4O88544 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.08■□□□□ 0.64
Cops4O88544 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cops4O88544 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cops4O88544 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops4O88544 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cops4O88544 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cops4O88544 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops4O88544 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Cops4O88544 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops4O88544 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cops4O88544 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops4O88544 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cops4O88544 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops4O88544 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops4O88544 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops4O88544 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops4O88544 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops4O88544 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops4O88544 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops4O88544 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.06■□□□□ 0.64
Cops4O88544 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.06■□□□□ 0.64
Cops4O88544 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.06■□□□□ 0.64
Cops4O88544 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cops4O88544 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cops4O88544 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops4O88544 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cops4O88544 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.05■□□□□ 0.64
Cops4O88544 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cops4O88544 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cops4O88544 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cops4O88544 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cops4O88544 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cops4O88544 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cops4O88544 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cops4O88544 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops4O88544 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cops4O88544 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops4O88544 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cops4O88544 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Cops4O88544 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops4O88544 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops4O88544 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Cops4O88544 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops4O88544 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops4O88544 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.03■□□□□ 0.64
Cops4O88544 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cops4O88544 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops4O88544 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops4O88544 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops4O88544 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops4O88544 Golph3-202ENSMUST00000226517 2359 ntBASIC19.03■□□□□ 0.64
Cops4O88544 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cops4O88544 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.03■□□□□ 0.64
Cops4O88544 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cops4O88544 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cops4O88544 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cops4O88544 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.02■□□□□ 0.64
Cops4O88544 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cops4O88544 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Cops4O88544 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cops4O88544 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cops4O88544 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cops4O88544 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops4O88544 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops4O88544 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.01■□□□□ 0.63
Cops4O88544 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops4O88544 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops4O88544 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cops4O88544 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cops4O88544 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cops4O88544 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cops4O88544 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cops4O88544 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cops4O88544 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cops4O88544 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cops4O88544 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cops4O88544 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cops4O88544 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cops4O88544 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cops4O88544 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cops4O88544 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms