Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf17O88472 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.52■□□□□ 0.72
Tnfrsf17O88472 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.52■□□□□ 0.72
Tnfrsf17O88472 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.52■□□□□ 0.72
Tnfrsf17O88472 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.52■□□□□ 0.72
Tnfrsf17O88472 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.52■□□□□ 0.72
Tnfrsf17O88472 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf17O88472 Gm10602-201ENSMUST00000098239 609 ntBASIC19.52■□□□□ 0.72
Tnfrsf17O88472 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Tnfrsf17O88472 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Tnfrsf17O88472 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf17O88472 Gm10033-202ENSMUST00000211874 928 ntBASIC19.51■□□□□ 0.71
Tnfrsf17O88472 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.51■□□□□ 0.71
Tnfrsf17O88472 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf17O88472 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf17O88472 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.5■□□□□ 0.71
Tnfrsf17O88472 Gm40848-201ENSMUST00000221998 324 ntBASIC19.5■□□□□ 0.71
Tnfrsf17O88472 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf17O88472 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf17O88472 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf17O88472 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf17O88472 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Tnfrsf17O88472 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Tnfrsf17O88472 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf17O88472 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.49■□□□□ 0.71
Tnfrsf17O88472 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.49■□□□□ 0.71
Tnfrsf17O88472 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf17O88472 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Tnfrsf17O88472 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.48■□□□□ 0.71
Tnfrsf17O88472 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf17O88472 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Tnfrsf17O88472 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf17O88472 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.48■□□□□ 0.71
Tnfrsf17O88472 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.47■□□□□ 0.71
Tnfrsf17O88472 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf17O88472 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf17O88472 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf17O88472 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Tnfrsf17O88472 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf17O88472 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf17O88472 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Tnfrsf17O88472 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf17O88472 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf17O88472 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf17O88472 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf17O88472 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf17O88472 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf17O88472 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf17O88472 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf17O88472 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf17O88472 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf17O88472 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.45■□□□□ 0.7
Tnfrsf17O88472 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tnfrsf17O88472 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Tnfrsf17O88472 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Tnfrsf17O88472 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.45■□□□□ 0.7
Tnfrsf17O88472 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.44■□□□□ 0.7
Tnfrsf17O88472 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Tnfrsf17O88472 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf17O88472 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf17O88472 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.44■□□□□ 0.7
Tnfrsf17O88472 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.44■□□□□ 0.7
Tnfrsf17O88472 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf17O88472 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf17O88472 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.44■□□□□ 0.7
Tnfrsf17O88472 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.44■□□□□ 0.7
Tnfrsf17O88472 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf17O88472 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf17O88472 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf17O88472 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf17O88472 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.43■□□□□ 0.7
Tnfrsf17O88472 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tnfrsf17O88472 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf17O88472 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf17O88472 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf17O88472 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf17O88472 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf17O88472 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.42■□□□□ 0.7
Tnfrsf17O88472 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Tnfrsf17O88472 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf17O88472 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf17O88472 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf17O88472 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Tnfrsf17O88472 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf17O88472 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Tnfrsf17O88472 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Tnfrsf17O88472 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf17O88472 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf17O88472 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf17O88472 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf17O88472 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf17O88472 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf17O88472 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf17O88472 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf17O88472 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.4■□□□□ 0.7
Tnfrsf17O88472 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Tnfrsf17O88472 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.4■□□□□ 0.7
Tnfrsf17O88472 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf17O88472 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf17O88472 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms