Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Capns1O88456 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Capns1O88456 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Capns1O88456 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Capns1O88456 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Capns1O88456 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.1■□□□□ 0.65
Capns1O88456 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Capns1O88456 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Capns1O88456 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Capns1O88456 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Capns1O88456 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Capns1O88456 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Capns1O88456 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.08■□□□□ 0.64
Capns1O88456 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Capns1O88456 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Capns1O88456 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Capns1O88456 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Capns1O88456 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.07■□□□□ 0.64
Capns1O88456 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.07■□□□□ 0.64
Capns1O88456 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Capns1O88456 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Capns1O88456 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Capns1O88456 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Capns1O88456 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Capns1O88456 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Capns1O88456 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Capns1O88456 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Capns1O88456 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Capns1O88456 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.06■□□□□ 0.64
Capns1O88456 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.06■□□□□ 0.64
Capns1O88456 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Capns1O88456 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Capns1O88456 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.06■□□□□ 0.64
Capns1O88456 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Capns1O88456 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Capns1O88456 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Capns1O88456 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Capns1O88456 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Capns1O88456 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.05■□□□□ 0.64
Capns1O88456 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.05■□□□□ 0.64
Capns1O88456 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Capns1O88456 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Capns1O88456 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Capns1O88456 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Capns1O88456 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.05■□□□□ 0.64
Capns1O88456 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Capns1O88456 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Capns1O88456 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Capns1O88456 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Capns1O88456 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Capns1O88456 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.03■□□□□ 0.64
Capns1O88456 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Capns1O88456 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Capns1O88456 Golph3-202ENSMUST00000226517 2359 ntBASIC19.03■□□□□ 0.64
Capns1O88456 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Capns1O88456 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Capns1O88456 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Capns1O88456 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Capns1O88456 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Capns1O88456 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
Capns1O88456 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Capns1O88456 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Capns1O88456 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Capns1O88456 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Capns1O88456 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Capns1O88456 Gm44428-201ENSMUST00000204474 874 ntBASIC19.01■□□□□ 0.63
Capns1O88456 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.01■□□□□ 0.63
Capns1O88456 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Capns1O88456 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Capns1O88456 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19■□□□□ 0.63
Capns1O88456 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19■□□□□ 0.63
Capns1O88456 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Capns1O88456 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Capns1O88456 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Capns1O88456 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19■□□□□ 0.63
Capns1O88456 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19■□□□□ 0.63
Capns1O88456 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Capns1O88456 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Capns1O88456 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Capns1O88456 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Capns1O88456 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Capns1O88456 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Capns1O88456 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Capns1O88456 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.99■□□□□ 0.63
Capns1O88456 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Capns1O88456 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Capns1O88456 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
Capns1O88456 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.98■□□□□ 0.63
Capns1O88456 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Capns1O88456 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Capns1O88456 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Capns1O88456 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Capns1O88456 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Capns1O88456 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Capns1O88456 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Capns1O88456 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Capns1O88456 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Capns1O88456 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Capns1O88456 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Capns1O88456 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms