Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pknox1O70477 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pknox1O70477 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pknox1O70477 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Pknox1O70477 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.62■□□□□ 0.89
Pknox1O70477 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pknox1O70477 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pknox1O70477 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pknox1O70477 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.61■□□□□ 0.89
Pknox1O70477 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pknox1O70477 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pknox1O70477 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pknox1O70477 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pknox1O70477 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pknox1O70477 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.6■□□□□ 0.89
Pknox1O70477 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pknox1O70477 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pknox1O70477 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pknox1O70477 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pknox1O70477 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pknox1O70477 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pknox1O70477 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pknox1O70477 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.59■□□□□ 0.89
Pknox1O70477 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pknox1O70477 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Pknox1O70477 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pknox1O70477 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pknox1O70477 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.58■□□□□ 0.89
Pknox1O70477 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.58■□□□□ 0.89
Pknox1O70477 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pknox1O70477 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
Pknox1O70477 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Pknox1O70477 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pknox1O70477 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pknox1O70477 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pknox1O70477 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pknox1O70477 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pknox1O70477 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.56■□□□□ 0.88
Pknox1O70477 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Pknox1O70477 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pknox1O70477 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.56■□□□□ 0.88
Pknox1O70477 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.56■□□□□ 0.88
Pknox1O70477 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pknox1O70477 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pknox1O70477 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pknox1O70477 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pknox1O70477 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pknox1O70477 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pknox1O70477 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pknox1O70477 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pknox1O70477 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pknox1O70477 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.54■□□□□ 0.88
Pknox1O70477 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pknox1O70477 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.54■□□□□ 0.88
Pknox1O70477 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pknox1O70477 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.53■□□□□ 0.88
Pknox1O70477 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pknox1O70477 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pknox1O70477 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pknox1O70477 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pknox1O70477 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pknox1O70477 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.53■□□□□ 0.88
Pknox1O70477 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pknox1O70477 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pknox1O70477 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pknox1O70477 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pknox1O70477 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pknox1O70477 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pknox1O70477 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pknox1O70477 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pknox1O70477 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pknox1O70477 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.52■□□□□ 0.88
Pknox1O70477 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pknox1O70477 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pknox1O70477 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pknox1O70477 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pknox1O70477 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pknox1O70477 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pknox1O70477 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pknox1O70477 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pknox1O70477 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pknox1O70477 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pknox1O70477 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pknox1O70477 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Pknox1O70477 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pknox1O70477 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pknox1O70477 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.5■□□□□ 0.87
Pknox1O70477 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pknox1O70477 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pknox1O70477 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pknox1O70477 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pknox1O70477 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pknox1O70477 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pknox1O70477 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pknox1O70477 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pknox1O70477 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pknox1O70477 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pknox1O70477 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Pknox1O70477 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pknox1O70477 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms