Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rdh5O55240 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rdh5O55240 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rdh5O55240 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rdh5O55240 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rdh5O55240 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rdh5O55240 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rdh5O55240 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Rdh5O55240 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rdh5O55240 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.66■□□□□ 0.74
Rdh5O55240 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rdh5O55240 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rdh5O55240 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rdh5O55240 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.66■□□□□ 0.74
Rdh5O55240 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rdh5O55240 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Rdh5O55240 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rdh5O55240 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rdh5O55240 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rdh5O55240 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rdh5O55240 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rdh5O55240 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.65■□□□□ 0.74
Rdh5O55240 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rdh5O55240 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rdh5O55240 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rdh5O55240 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rdh5O55240 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rdh5O55240 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rdh5O55240 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.64■□□□□ 0.73
Rdh5O55240 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rdh5O55240 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rdh5O55240 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rdh5O55240 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rdh5O55240 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rdh5O55240 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rdh5O55240 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.63■□□□□ 0.73
Rdh5O55240 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rdh5O55240 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rdh5O55240 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rdh5O55240 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rdh5O55240 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rdh5O55240 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rdh5O55240 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rdh5O55240 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rdh5O55240 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rdh5O55240 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.62■□□□□ 0.73
Rdh5O55240 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.62■□□□□ 0.73
Rdh5O55240 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rdh5O55240 Gm10232-201ENSMUST00000089221 720 ntBASIC19.62■□□□□ 0.73
Rdh5O55240 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rdh5O55240 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rdh5O55240 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.61■□□□□ 0.73
Rdh5O55240 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rdh5O55240 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rdh5O55240 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.61■□□□□ 0.73
Rdh5O55240 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rdh5O55240 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.61■□□□□ 0.73
Rdh5O55240 Rps24-207ENSMUST00000224568 714 ntBASIC19.61■□□□□ 0.73
Rdh5O55240 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rdh5O55240 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rdh5O55240 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rdh5O55240 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rdh5O55240 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rdh5O55240 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rdh5O55240 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rdh5O55240 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.6■□□□□ 0.73
Rdh5O55240 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.6■□□□□ 0.73
Rdh5O55240 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.6■□□□□ 0.73
Rdh5O55240 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rdh5O55240 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rdh5O55240 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rdh5O55240 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
Rdh5O55240 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rdh5O55240 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh5O55240 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh5O55240 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh5O55240 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rdh5O55240 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.59■□□□□ 0.73
Rdh5O55240 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh5O55240 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh5O55240 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh5O55240 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh5O55240 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh5O55240 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.58■□□□□ 0.73
Rdh5O55240 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rdh5O55240 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rdh5O55240 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rdh5O55240 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.58■□□□□ 0.73
Rdh5O55240 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rdh5O55240 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Rdh5O55240 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rdh5O55240 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rdh5O55240 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.57■□□□□ 0.72
Rdh5O55240 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rdh5O55240 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rdh5O55240 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rdh5O55240 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rdh5O55240 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rdh5O55240 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rdh5O55240 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms