Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh12O55134 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh12O55134 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh12O55134 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh12O55134 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh12O55134 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdh12O55134 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh12O55134 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh12O55134 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh12O55134 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh12O55134 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh12O55134 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdh12O55134 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh12O55134 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.79■□□□□ 0.6
Pcdh12O55134 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh12O55134 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh12O55134 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdh12O55134 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh12O55134 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh12O55134 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Pcdh12O55134 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh12O55134 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh12O55134 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdh12O55134 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh12O55134 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdh12O55134 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh12O55134 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh12O55134 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.77■□□□□ 0.6
Pcdh12O55134 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh12O55134 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdh12O55134 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.77■□□□□ 0.59
Pcdh12O55134 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.77■□□□□ 0.59
Pcdh12O55134 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh12O55134 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh12O55134 Notumos-201ENSMUST00000151998 2659 ntBASIC18.76■□□□□ 0.59
Pcdh12O55134 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.76■□□□□ 0.59
Pcdh12O55134 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh12O55134 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh12O55134 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh12O55134 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh12O55134 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh12O55134 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh12O55134 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh12O55134 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh12O55134 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh12O55134 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh12O55134 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh12O55134 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh12O55134 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh12O55134 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh12O55134 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh12O55134 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh12O55134 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh12O55134 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdh12O55134 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdh12O55134 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.74■□□□□ 0.59
Pcdh12O55134 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh12O55134 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh12O55134 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdh12O55134 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdh12O55134 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.74■□□□□ 0.59
Pcdh12O55134 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh12O55134 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdh12O55134 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh12O55134 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh12O55134 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdh12O55134 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh12O55134 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.73■□□□□ 0.59
Pcdh12O55134 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.73■□□□□ 0.59
Pcdh12O55134 Rps24-207ENSMUST00000224568 714 ntBASIC18.73■□□□□ 0.59
Pcdh12O55134 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh12O55134 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh12O55134 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh12O55134 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh12O55134 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh12O55134 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh12O55134 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh12O55134 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh12O55134 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh12O55134 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh12O55134 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh12O55134 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh12O55134 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh12O55134 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.71■□□□□ 0.59
Pcdh12O55134 Gm45102-201ENSMUST00000207427 857 ntBASIC18.71■□□□□ 0.59
Pcdh12O55134 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdh12O55134 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pcdh12O55134 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh12O55134 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh12O55134 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdh12O55134 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdh12O55134 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.71■□□□□ 0.58
Pcdh12O55134 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh12O55134 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh12O55134 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh12O55134 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh12O55134 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh12O55134 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh12O55134 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdh12O55134 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms