Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Per2O54943 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Per2O54943 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Per2O54943 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Per2O54943 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Per2O54943 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Per2O54943 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Per2O54943 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Per2O54943 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Per2O54943 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Per2O54943 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Per2O54943 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Per2O54943 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.66■■□□□ 1.06
Per2O54943 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Per2O54943 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.66■■□□□ 1.06
Per2O54943 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Per2O54943 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
Per2O54943 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Per2O54943 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Per2O54943 Gm13238-201ENSMUST00000117655 780 ntBASIC21.65■■□□□ 1.06
Per2O54943 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Per2O54943 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.65■■□□□ 1.06
Per2O54943 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Per2O54943 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.64■■□□□ 1.06
Per2O54943 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Per2O54943 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Per2O54943 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Per2O54943 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Per2O54943 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Per2O54943 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Per2O54943 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Per2O54943 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Per2O54943 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Per2O54943 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Per2O54943 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Per2O54943 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Per2O54943 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Per2O54943 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Per2O54943 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Per2O54943 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Per2O54943 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Per2O54943 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Per2O54943 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Per2O54943 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Per2O54943 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Per2O54943 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Per2O54943 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Per2O54943 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Per2O54943 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.61■■□□□ 1.05
Per2O54943 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Per2O54943 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Per2O54943 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Per2O54943 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.61■■□□□ 1.05
Per2O54943 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Per2O54943 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Per2O54943 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Per2O54943 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Per2O54943 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Per2O54943 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Per2O54943 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Per2O54943 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Per2O54943 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Per2O54943 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Per2O54943 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.6■■□□□ 1.05
Per2O54943 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Per2O54943 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Per2O54943 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Per2O54943 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Per2O54943 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Per2O54943 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.6■■□□□ 1.05
Per2O54943 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Per2O54943 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Per2O54943 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Per2O54943 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Per2O54943 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Per2O54943 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.58■■□□□ 1.05
Per2O54943 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Per2O54943 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Per2O54943 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Per2O54943 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Per2O54943 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.57■■□□□ 1.04
Per2O54943 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Per2O54943 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.57■■□□□ 1.04
Per2O54943 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Per2O54943 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Per2O54943 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Per2O54943 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Per2O54943 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.56■■□□□ 1.04
Per2O54943 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Per2O54943 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Per2O54943 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Per2O54943 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Per2O54943 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Per2O54943 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Per2O54943 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Per2O54943 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Per2O54943 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Per2O54943 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Per2O54943 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Per2O54943 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms