Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Matn3O35701 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Matn3O35701 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Matn3O35701 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Matn3O35701 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.82■□□□□ 0.6
Matn3O35701 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Matn3O35701 Terc-201ENSMUST00000082862 423 ntBASIC18.82■□□□□ 0.6
Matn3O35701 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Matn3O35701 Gm4799-201ENSMUST00000095396 657 ntBASIC18.82■□□□□ 0.6
Matn3O35701 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Matn3O35701 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Matn3O35701 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Matn3O35701 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Matn3O35701 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Matn3O35701 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.81■□□□□ 0.6
Matn3O35701 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Matn3O35701 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Matn3O35701 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Matn3O35701 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Matn3O35701 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.81■□□□□ 0.6
Matn3O35701 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Matn3O35701 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Matn3O35701 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Matn3O35701 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Matn3O35701 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Matn3O35701 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Matn3O35701 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Matn3O35701 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Matn3O35701 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Matn3O35701 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Matn3O35701 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Matn3O35701 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Matn3O35701 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Matn3O35701 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Matn3O35701 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Matn3O35701 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Matn3O35701 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Matn3O35701 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Matn3O35701 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.78■□□□□ 0.6
Matn3O35701 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.78■□□□□ 0.6
Matn3O35701 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Matn3O35701 Mir6538-201ENSMUST00000183713 110 ntBASIC18.78■□□□□ 0.6
Matn3O35701 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Matn3O35701 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Matn3O35701 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Matn3O35701 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.78■□□□□ 0.6
Matn3O35701 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Matn3O35701 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Matn3O35701 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Matn3O35701 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Matn3O35701 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Matn3O35701 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Matn3O35701 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Matn3O35701 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Matn3O35701 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.77■□□□□ 0.6
Matn3O35701 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Matn3O35701 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Matn3O35701 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Matn3O35701 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Matn3O35701 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Matn3O35701 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Matn3O35701 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Matn3O35701 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Matn3O35701 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Matn3O35701 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.76■□□□□ 0.59
Matn3O35701 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.76■□□□□ 0.59
Matn3O35701 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Matn3O35701 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Matn3O35701 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.76■□□□□ 0.59
Matn3O35701 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Matn3O35701 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Matn3O35701 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Matn3O35701 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Matn3O35701 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Matn3O35701 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Matn3O35701 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.75■□□□□ 0.59
Matn3O35701 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Matn3O35701 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Matn3O35701 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Matn3O35701 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Matn3O35701 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Matn3O35701 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Matn3O35701 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.74■□□□□ 0.59
Matn3O35701 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Matn3O35701 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Matn3O35701 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Matn3O35701 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.74■□□□□ 0.59
Matn3O35701 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Matn3O35701 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Matn3O35701 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Matn3O35701 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Matn3O35701 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Matn3O35701 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Matn3O35701 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Matn3O35701 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Matn3O35701 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Matn3O35701 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Matn3O35701 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Matn3O35701 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Matn3O35701 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms