Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.94■□□□□ 0.78
Lhx8O35652 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx8O35652 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx8O35652 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx8O35652 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx8O35652 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx8O35652 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx8O35652 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx8O35652 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx8O35652 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
Lhx8O35652 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx8O35652 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx8O35652 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx8O35652 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Lhx8O35652 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx8O35652 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx8O35652 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.93■□□□□ 0.78
Lhx8O35652 Gm9847-201ENSMUST00000052528 599 ntBASIC19.93■□□□□ 0.78
Lhx8O35652 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.93■□□□□ 0.78
Lhx8O35652 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx8O35652 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Lhx8O35652 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx8O35652 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.92■□□□□ 0.78
Lhx8O35652 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx8O35652 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lhx8O35652 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx8O35652 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx8O35652 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx8O35652 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx8O35652 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Lhx8O35652 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx8O35652 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lhx8O35652 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx8O35652 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx8O35652 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Lhx8O35652 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx8O35652 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx8O35652 AC154634.3-201ENSMUST00000224589 736 ntBASIC19.9■□□□□ 0.78
Lhx8O35652 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx8O35652 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx8O35652 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx8O35652 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx8O35652 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lhx8O35652 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx8O35652 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Lhx8O35652 Gm8495-201ENSMUST00000188740 694 ntBASIC19.89■□□□□ 0.77
Lhx8O35652 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx8O35652 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lhx8O35652 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Lhx8O35652 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx8O35652 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx8O35652 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.88■□□□□ 0.77
Lhx8O35652 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx8O35652 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx8O35652 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx8O35652 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lhx8O35652 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx8O35652 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx8O35652 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx8O35652 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx8O35652 Gm43371-201ENSMUST00000202838 1031 ntBASIC19.87■□□□□ 0.77
Lhx8O35652 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx8O35652 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lhx8O35652 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx8O35652 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Lhx8O35652 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx8O35652 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx8O35652 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Lhx8O35652 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx8O35652 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx8O35652 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx8O35652 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Lhx8O35652 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lhx8O35652 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx8O35652 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx8O35652 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx8O35652 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx8O35652 Gm29257-201ENSMUST00000186115 639 ntBASIC19.85■□□□□ 0.77
Lhx8O35652 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx8O35652 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.85■□□□□ 0.77
Lhx8O35652 Gm10232-201ENSMUST00000089221 720 ntBASIC19.85■□□□□ 0.77
Lhx8O35652 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx8O35652 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx8O35652 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx8O35652 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lhx8O35652 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.84■□□□□ 0.77
Lhx8O35652 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx8O35652 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx8O35652 Gm19891-201ENSMUST00000189771 303 ntBASIC19.84■□□□□ 0.77
Lhx8O35652 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Lhx8O35652 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lhx8O35652 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx8O35652 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.83■□□□□ 0.77
Lhx8O35652 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx8O35652 Notumos-201ENSMUST00000151998 2659 ntBASIC19.83■□□□□ 0.77
Lhx8O35652 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx8O35652 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx8O35652 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx8O35652 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.83■□□□□ 0.77
Lhx8O35652 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms