Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.49■□□□□ 0.87
Slc1a6O35544 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a6O35544 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a6O35544 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a6O35544 Gm11687-201ENSMUST00000118911 886 ntBASIC20.49■□□□□ 0.87
Slc1a6O35544 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a6O35544 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a6O35544 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a6O35544 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc1a6O35544 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Slc1a6O35544 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc1a6O35544 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.48■□□□□ 0.87
Slc1a6O35544 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Slc1a6O35544 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slc1a6O35544 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc1a6O35544 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc1a6O35544 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.47■□□□□ 0.87
Slc1a6O35544 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Slc1a6O35544 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc1a6O35544 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc1a6O35544 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc1a6O35544 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc1a6O35544 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc1a6O35544 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc1a6O35544 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Slc1a6O35544 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Slc1a6O35544 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc1a6O35544 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.46■□□□□ 0.87
Slc1a6O35544 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Slc1a6O35544 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc1a6O35544 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc1a6O35544 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc1a6O35544 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
Slc1a6O35544 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc1a6O35544 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc1a6O35544 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc1a6O35544 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc1a6O35544 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc1a6O35544 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.45■□□□□ 0.86
Slc1a6O35544 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.45■□□□□ 0.86
Slc1a6O35544 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc1a6O35544 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc1a6O35544 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc1a6O35544 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Slc1a6O35544 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc1a6O35544 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Slc1a6O35544 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Slc1a6O35544 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Slc1a6O35544 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc1a6O35544 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc1a6O35544 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.43■□□□□ 0.86
Slc1a6O35544 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.43■□□□□ 0.86
Slc1a6O35544 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc1a6O35544 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc1a6O35544 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc1a6O35544 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Slc1a6O35544 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc1a6O35544 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc1a6O35544 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Slc1a6O35544 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc1a6O35544 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.42■□□□□ 0.86
Slc1a6O35544 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc1a6O35544 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc1a6O35544 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc1a6O35544 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc1a6O35544 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.42■□□□□ 0.86
Slc1a6O35544 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Slc1a6O35544 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc1a6O35544 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc1a6O35544 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Slc1a6O35544 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc1a6O35544 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Slc1a6O35544 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc1a6O35544 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc1a6O35544 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc1a6O35544 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc1a6O35544 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc1a6O35544 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc1a6O35544 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc1a6O35544 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc1a6O35544 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc1a6O35544 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc1a6O35544 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc1a6O35544 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc1a6O35544 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Slc1a6O35544 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc1a6O35544 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc1a6O35544 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc1a6O35544 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.4■□□□□ 0.86
Slc1a6O35544 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.4■□□□□ 0.86
Slc1a6O35544 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slc1a6O35544 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slc1a6O35544 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc1a6O35544 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc1a6O35544 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.39■□□□□ 0.85
Slc1a6O35544 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slc1a6O35544 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Slc1a6O35544 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc1a6O35544 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc1a6O35544 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms