Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk3O35492 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clk3O35492 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk3O35492 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.67■□□□□ 0.74
Clk3O35492 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk3O35492 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk3O35492 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Clk3O35492 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clk3O35492 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clk3O35492 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clk3O35492 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.66■□□□□ 0.74
Clk3O35492 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.66■□□□□ 0.74
Clk3O35492 Gm5921-201ENSMUST00000075898 882 ntBASIC19.66■□□□□ 0.74
Clk3O35492 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clk3O35492 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk3O35492 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk3O35492 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.65■□□□□ 0.74
Clk3O35492 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk3O35492 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk3O35492 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk3O35492 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk3O35492 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk3O35492 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Clk3O35492 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clk3O35492 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clk3O35492 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clk3O35492 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clk3O35492 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.64■□□□□ 0.73
Clk3O35492 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.64■□□□□ 0.73
Clk3O35492 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk3O35492 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk3O35492 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Clk3O35492 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk3O35492 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk3O35492 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Clk3O35492 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk3O35492 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clk3O35492 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clk3O35492 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clk3O35492 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clk3O35492 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clk3O35492 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clk3O35492 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk3O35492 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk3O35492 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clk3O35492 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk3O35492 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clk3O35492 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk3O35492 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Clk3O35492 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.62■□□□□ 0.73
Clk3O35492 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.62■□□□□ 0.73
Clk3O35492 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.62■□□□□ 0.73
Clk3O35492 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk3O35492 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk3O35492 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk3O35492 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Clk3O35492 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clk3O35492 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk3O35492 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk3O35492 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk3O35492 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk3O35492 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clk3O35492 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Clk3O35492 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk3O35492 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Clk3O35492 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk3O35492 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Clk3O35492 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Clk3O35492 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk3O35492 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk3O35492 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clk3O35492 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk3O35492 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk3O35492 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Clk3O35492 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk3O35492 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk3O35492 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Clk3O35492 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Clk3O35492 Gm45444-201ENSMUST00000211394 898 ntBASIC19.59■□□□□ 0.73
Clk3O35492 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk3O35492 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk3O35492 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Clk3O35492 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clk3O35492 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clk3O35492 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clk3O35492 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clk3O35492 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk3O35492 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk3O35492 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk3O35492 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk3O35492 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk3O35492 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Clk3O35492 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Clk3O35492 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Clk3O35492 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.57■□□□□ 0.72
Clk3O35492 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.57■□□□□ 0.72
Clk3O35492 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk3O35492 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Clk3O35492 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Clk3O35492 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms