Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atn1O35126 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Atn1O35126 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atn1O35126 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atn1O35126 Gm10420-201ENSMUST00000121713 882 ntBASIC20.25■□□□□ 0.83
Atn1O35126 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Atn1O35126 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atn1O35126 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atn1O35126 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atn1O35126 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atn1O35126 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atn1O35126 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Atn1O35126 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atn1O35126 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atn1O35126 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atn1O35126 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atn1O35126 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atn1O35126 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atn1O35126 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atn1O35126 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atn1O35126 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atn1O35126 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atn1O35126 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Atn1O35126 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atn1O35126 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atn1O35126 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Atn1O35126 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atn1O35126 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atn1O35126 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atn1O35126 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.22■□□□□ 0.83
Atn1O35126 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atn1O35126 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atn1O35126 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atn1O35126 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atn1O35126 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Atn1O35126 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Atn1O35126 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atn1O35126 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atn1O35126 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atn1O35126 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atn1O35126 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atn1O35126 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.2■□□□□ 0.82
Atn1O35126 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.2■□□□□ 0.82
Atn1O35126 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atn1O35126 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Atn1O35126 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atn1O35126 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atn1O35126 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atn1O35126 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atn1O35126 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atn1O35126 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atn1O35126 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Atn1O35126 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atn1O35126 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atn1O35126 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Atn1O35126 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Atn1O35126 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atn1O35126 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.18■□□□□ 0.82
Atn1O35126 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atn1O35126 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atn1O35126 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Atn1O35126 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Atn1O35126 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atn1O35126 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Atn1O35126 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atn1O35126 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Atn1O35126 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Atn1O35126 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atn1O35126 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atn1O35126 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atn1O35126 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Atn1O35126 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atn1O35126 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atn1O35126 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atn1O35126 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atn1O35126 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.16■□□□□ 0.82
Atn1O35126 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atn1O35126 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atn1O35126 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Atn1O35126 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atn1O35126 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atn1O35126 Notumos-201ENSMUST00000151998 2659 ntBASIC20.15■□□□□ 0.82
Atn1O35126 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.15■□□□□ 0.82
Atn1O35126 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atn1O35126 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Atn1O35126 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
Atn1O35126 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.15■□□□□ 0.82
Atn1O35126 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Atn1O35126 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atn1O35126 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atn1O35126 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atn1O35126 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atn1O35126 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atn1O35126 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atn1O35126 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atn1O35126 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atn1O35126 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atn1O35126 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Atn1O35126 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Atn1O35126 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms