Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Gm44428-201ENSMUST00000204474 874 ntBASIC19.64■□□□□ 0.73
ClockO08785 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ClockO08785 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.64■□□□□ 0.73
ClockO08785 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClockO08785 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ClockO08785 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClockO08785 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClockO08785 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
ClockO08785 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClockO08785 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClockO08785 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ClockO08785 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ClockO08785 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ClockO08785 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClockO08785 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
ClockO08785 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClockO08785 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ClockO08785 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ClockO08785 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClockO08785 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClockO08785 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ClockO08785 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ClockO08785 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ClockO08785 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ClockO08785 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ClockO08785 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ClockO08785 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ClockO08785 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
ClockO08785 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ClockO08785 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ClockO08785 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ClockO08785 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ClockO08785 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ClockO08785 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ClockO08785 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.61■□□□□ 0.73
ClockO08785 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ClockO08785 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ClockO08785 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ClockO08785 Golph3-202ENSMUST00000226517 2359 ntBASIC19.61■□□□□ 0.73
ClockO08785 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClockO08785 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.6■□□□□ 0.73
ClockO08785 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClockO08785 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClockO08785 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClockO08785 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.6■□□□□ 0.73
ClockO08785 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClockO08785 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ClockO08785 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClockO08785 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClockO08785 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClockO08785 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClockO08785 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ClockO08785 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClockO08785 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClockO08785 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ClockO08785 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClockO08785 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClockO08785 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClockO08785 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClockO08785 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ClockO08785 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ClockO08785 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ClockO08785 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ClockO08785 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClockO08785 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClockO08785 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ClockO08785 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClockO08785 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ClockO08785 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ClockO08785 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ClockO08785 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClockO08785 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClockO08785 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ClockO08785 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ClockO08785 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ClockO08785 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ClockO08785 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ClockO08785 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ClockO08785 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClockO08785 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ClockO08785 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClockO08785 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClockO08785 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClockO08785 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ClockO08785 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClockO08785 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ClockO08785 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClockO08785 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ClockO08785 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClockO08785 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClockO08785 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClockO08785 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClockO08785 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClockO08785 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClockO08785 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClockO08785 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
ClockO08785 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.53■□□□□ 0.72
ClockO08785 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ClockO08785 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ClockO08785 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms