Protein–RNA interactions for Protein: J3QNG1

Gm6408, Predicted gene 6408, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6408J3QNG1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm6408J3QNG1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm6408J3QNG1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm6408J3QNG1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm6408J3QNG1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm6408J3QNG1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm6408J3QNG1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm6408J3QNG1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm6408J3QNG1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm6408J3QNG1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm6408J3QNG1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm6408J3QNG1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm6408J3QNG1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm6408J3QNG1 Cap2-205ENSMUST00000225824 1634 ntBASIC20.71■□□□□ 0.91
Gm6408J3QNG1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm6408J3QNG1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm6408J3QNG1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm6408J3QNG1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm6408J3QNG1 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.71■□□□□ 0.91
Gm6408J3QNG1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm6408J3QNG1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm6408J3QNG1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm6408J3QNG1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm6408J3QNG1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm6408J3QNG1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.7■□□□□ 0.9
Gm6408J3QNG1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm6408J3QNG1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm6408J3QNG1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Gm6408J3QNG1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm6408J3QNG1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Gm6408J3QNG1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm6408J3QNG1 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.69■□□□□ 0.9
Gm6408J3QNG1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm6408J3QNG1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm6408J3QNG1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm6408J3QNG1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm6408J3QNG1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm6408J3QNG1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm6408J3QNG1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Gm6408J3QNG1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm6408J3QNG1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm6408J3QNG1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm6408J3QNG1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Gm6408J3QNG1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Gm6408J3QNG1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm6408J3QNG1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm6408J3QNG1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.67■□□□□ 0.9
Gm6408J3QNG1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.67■□□□□ 0.9
Gm6408J3QNG1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm6408J3QNG1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
Gm6408J3QNG1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm6408J3QNG1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm6408J3QNG1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm6408J3QNG1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm6408J3QNG1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm6408J3QNG1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Gm6408J3QNG1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gm6408J3QNG1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Gm6408J3QNG1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.67■□□□□ 0.9
Gm6408J3QNG1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm6408J3QNG1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm6408J3QNG1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm6408J3QNG1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.66■□□□□ 0.9
Gm6408J3QNG1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm6408J3QNG1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm6408J3QNG1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm6408J3QNG1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm6408J3QNG1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm6408J3QNG1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm6408J3QNG1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.65■□□□□ 0.9
Gm6408J3QNG1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm6408J3QNG1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.65■□□□□ 0.9
Gm6408J3QNG1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.65■□□□□ 0.9
Gm6408J3QNG1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm6408J3QNG1 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.65■□□□□ 0.9
Gm6408J3QNG1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm6408J3QNG1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm6408J3QNG1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm6408J3QNG1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm6408J3QNG1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm6408J3QNG1 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.64■□□□□ 0.89
Gm6408J3QNG1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm6408J3QNG1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Gm6408J3QNG1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm6408J3QNG1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Gm6408J3QNG1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm6408J3QNG1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm6408J3QNG1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm6408J3QNG1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm6408J3QNG1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm6408J3QNG1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm6408J3QNG1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm6408J3QNG1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm6408J3QNG1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm6408J3QNG1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Gm6408J3QNG1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.63■□□□□ 0.89
Gm6408J3QNG1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm6408J3QNG1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm6408J3QNG1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Gm6408J3QNG1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms