Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atf6F6VAN0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Atf6F6VAN0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Atf6F6VAN0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Atf6F6VAN0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Atf6F6VAN0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.35■■□□□ 1.01
Atf6F6VAN0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atf6F6VAN0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Atf6F6VAN0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Atf6F6VAN0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Atf6F6VAN0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atf6F6VAN0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
Atf6F6VAN0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Atf6F6VAN0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Atf6F6VAN0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Atf6F6VAN0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atf6F6VAN0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atf6F6VAN0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atf6F6VAN0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Atf6F6VAN0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Atf6F6VAN0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atf6F6VAN0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Atf6F6VAN0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atf6F6VAN0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.3■■□□□ 1
Atf6F6VAN0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Atf6F6VAN0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.3■■□□□ 1
Atf6F6VAN0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atf6F6VAN0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Atf6F6VAN0 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.3■■□□□ 1
Atf6F6VAN0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atf6F6VAN0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atf6F6VAN0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atf6F6VAN0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atf6F6VAN0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Atf6F6VAN0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.29■■□□□ 1
Atf6F6VAN0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Atf6F6VAN0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atf6F6VAN0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.29■■□□□ 1
Atf6F6VAN0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atf6F6VAN0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Atf6F6VAN0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atf6F6VAN0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atf6F6VAN0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.27■■□□□ 1
Atf6F6VAN0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Atf6F6VAN0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atf6F6VAN0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.27■■□□□ 1
Atf6F6VAN0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atf6F6VAN0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Atf6F6VAN0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Atf6F6VAN0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Atf6F6VAN0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Atf6F6VAN0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atf6F6VAN0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atf6F6VAN0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atf6F6VAN0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atf6F6VAN0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Atf6F6VAN0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Atf6F6VAN0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf6F6VAN0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf6F6VAN0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf6F6VAN0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Atf6F6VAN0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.25■□□□□ 0.99
Atf6F6VAN0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Atf6F6VAN0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf6F6VAN0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf6F6VAN0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf6F6VAN0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Atf6F6VAN0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf6F6VAN0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atf6F6VAN0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Atf6F6VAN0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atf6F6VAN0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atf6F6VAN0 Gm10232-201ENSMUST00000089221 720 ntBASIC21.24■□□□□ 0.99
Atf6F6VAN0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.24■□□□□ 0.99
Atf6F6VAN0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atf6F6VAN0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atf6F6VAN0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Atf6F6VAN0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Atf6F6VAN0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atf6F6VAN0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atf6F6VAN0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.23■□□□□ 0.99
Atf6F6VAN0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.23■□□□□ 0.99
Atf6F6VAN0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.23■□□□□ 0.99
Atf6F6VAN0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atf6F6VAN0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atf6F6VAN0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
Atf6F6VAN0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atf6F6VAN0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Atf6F6VAN0 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.23■□□□□ 0.99
Atf6F6VAN0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf6F6VAN0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf6F6VAN0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Atf6F6VAN0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Atf6F6VAN0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf6F6VAN0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.22■□□□□ 0.99
Atf6F6VAN0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Atf6F6VAN0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Atf6F6VAN0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Atf6F6VAN0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf6F6VAN0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms