Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.15■□□□□ 0.98
Ccdc149F6V035 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Ccdc149F6V035 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ccdc149F6V035 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc149F6V035 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc149F6V035 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc149F6V035 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc149F6V035 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.14■□□□□ 0.98
Ccdc149F6V035 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Ccdc149F6V035 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc149F6V035 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.14■□□□□ 0.97
Ccdc149F6V035 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.14■□□□□ 0.97
Ccdc149F6V035 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.14■□□□□ 0.97
Ccdc149F6V035 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.14■□□□□ 0.97
Ccdc149F6V035 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.13■□□□□ 0.97
Ccdc149F6V035 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.13■□□□□ 0.97
Ccdc149F6V035 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc149F6V035 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc149F6V035 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc149F6V035 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc149F6V035 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc149F6V035 Gm7143-201ENSMUST00000222811 859 ntBASIC21.12■□□□□ 0.97
Ccdc149F6V035 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc149F6V035 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.12■□□□□ 0.97
Ccdc149F6V035 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc149F6V035 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc149F6V035 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc149F6V035 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.11■□□□□ 0.97
Ccdc149F6V035 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc149F6V035 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc149F6V035 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc149F6V035 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc149F6V035 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc149F6V035 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc149F6V035 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ccdc149F6V035 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc149F6V035 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc149F6V035 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc149F6V035 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc149F6V035 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ccdc149F6V035 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc149F6V035 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc149F6V035 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc149F6V035 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Ccdc149F6V035 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc149F6V035 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc149F6V035 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc149F6V035 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc149F6V035 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc149F6V035 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.08■□□□□ 0.97
Ccdc149F6V035 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc149F6V035 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc149F6V035 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc149F6V035 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc149F6V035 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc149F6V035 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc149F6V035 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc149F6V035 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc149F6V035 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc149F6V035 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.06■□□□□ 0.96
Ccdc149F6V035 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc149F6V035 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ccdc149F6V035 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc149F6V035 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc149F6V035 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc149F6V035 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc149F6V035 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc149F6V035 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc149F6V035 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc149F6V035 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc149F6V035 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc149F6V035 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc149F6V035 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.05■□□□□ 0.96
Ccdc149F6V035 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ccdc149F6V035 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Ccdc149F6V035 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc149F6V035 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ccdc149F6V035 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc149F6V035 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc149F6V035 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc149F6V035 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc149F6V035 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc149F6V035 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ccdc149F6V035 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc149F6V035 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc149F6V035 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.04■□□□□ 0.96
Ccdc149F6V035 Serp2-204ENSMUST00000228055 705 ntBASIC21.04■□□□□ 0.96
Ccdc149F6V035 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc149F6V035 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.04■□□□□ 0.96
Ccdc149F6V035 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc149F6V035 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc149F6V035 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.03■□□□□ 0.96
Ccdc149F6V035 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc149F6V035 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc149F6V035 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc149F6V035 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc149F6V035 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc149F6V035 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.03■□□□□ 0.96
Ccdc149F6V035 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc149F6V035 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms