Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh17E9PXF0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh17E9PXF0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh17E9PXF0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Pcdh17E9PXF0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.3■□□□□ 0.68
Pcdh17E9PXF0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.3■□□□□ 0.68
Pcdh17E9PXF0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.3■□□□□ 0.68
Pcdh17E9PXF0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.3■□□□□ 0.68
Pcdh17E9PXF0 Golgb1-201ENSMUST00000023534 498 ntBASIC19.3■□□□□ 0.68
Pcdh17E9PXF0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh17E9PXF0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh17E9PXF0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh17E9PXF0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdh17E9PXF0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh17E9PXF0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh17E9PXF0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh17E9PXF0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdh17E9PXF0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdh17E9PXF0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh17E9PXF0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh17E9PXF0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdh17E9PXF0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh17E9PXF0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh17E9PXF0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh17E9PXF0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh17E9PXF0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdh17E9PXF0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdh17E9PXF0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh17E9PXF0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdh17E9PXF0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh17E9PXF0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh17E9PXF0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh17E9PXF0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdh17E9PXF0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdh17E9PXF0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh17E9PXF0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh17E9PXF0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh17E9PXF0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh17E9PXF0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.26■□□□□ 0.67
Pcdh17E9PXF0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdh17E9PXF0 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.26■□□□□ 0.67
Pcdh17E9PXF0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh17E9PXF0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh17E9PXF0 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.26■□□□□ 0.67
Pcdh17E9PXF0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh17E9PXF0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh17E9PXF0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcdh17E9PXF0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdh17E9PXF0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh17E9PXF0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Pcdh17E9PXF0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh17E9PXF0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Pcdh17E9PXF0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh17E9PXF0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh17E9PXF0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh17E9PXF0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdh17E9PXF0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh17E9PXF0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh17E9PXF0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pcdh17E9PXF0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh17E9PXF0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh17E9PXF0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh17E9PXF0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdh17E9PXF0 Gm12821-201ENSMUST00000120022 600 ntBASIC19.23■□□□□ 0.67
Pcdh17E9PXF0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh17E9PXF0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh17E9PXF0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh17E9PXF0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh17E9PXF0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Pcdh17E9PXF0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh17E9PXF0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh17E9PXF0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh17E9PXF0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh17E9PXF0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdh17E9PXF0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh17E9PXF0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh17E9PXF0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh17E9PXF0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh17E9PXF0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh17E9PXF0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh17E9PXF0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh17E9PXF0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh17E9PXF0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh17E9PXF0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh17E9PXF0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh17E9PXF0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh17E9PXF0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh17E9PXF0 Gm27454-201ENSMUST00000185090 204 ntBASIC19.2■□□□□ 0.66
Pcdh17E9PXF0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh17E9PXF0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh17E9PXF0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh17E9PXF0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh17E9PXF0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh17E9PXF0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdh17E9PXF0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh17E9PXF0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pcdh17E9PXF0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.19■□□□□ 0.66
Pcdh17E9PXF0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdh17E9PXF0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.19■□□□□ 0.66
Pcdh17E9PXF0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms