Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col6a4A2AX52 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col6a4A2AX52 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Col6a4A2AX52 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.58■□□□□ 0.41
Col6a4A2AX52 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.58■□□□□ 0.41
Col6a4A2AX52 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col6a4A2AX52 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col6a4A2AX52 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.58■□□□□ 0.4
Col6a4A2AX52 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col6a4A2AX52 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col6a4A2AX52 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col6a4A2AX52 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col6a4A2AX52 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a4A2AX52 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a4A2AX52 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a4A2AX52 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a4A2AX52 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.57■□□□□ 0.4
Col6a4A2AX52 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Col6a4A2AX52 Gm27011-201ENSMUST00000182352 972 ntBASIC17.56■□□□□ 0.4
Col6a4A2AX52 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a4A2AX52 Gm42642-201ENSMUST00000200683 355 ntBASIC17.56■□□□□ 0.4
Col6a4A2AX52 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Col6a4A2AX52 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a4A2AX52 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a4A2AX52 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a4A2AX52 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Col6a4A2AX52 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.55■□□□□ 0.4
Col6a4A2AX52 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Col6a4A2AX52 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a4A2AX52 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a4A2AX52 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a4A2AX52 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Col6a4A2AX52 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
Col6a4A2AX52 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.55■□□□□ 0.4
Col6a4A2AX52 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a4A2AX52 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Col6a4A2AX52 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Col6a4A2AX52 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a4A2AX52 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a4A2AX52 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.54■□□□□ 0.4
Col6a4A2AX52 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a4A2AX52 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a4A2AX52 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a4A2AX52 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a4A2AX52 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a4A2AX52 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col6a4A2AX52 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col6a4A2AX52 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col6a4A2AX52 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col6a4A2AX52 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col6a4A2AX52 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col6a4A2AX52 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col6a4A2AX52 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a4A2AX52 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a4A2AX52 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a4A2AX52 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a4A2AX52 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a4A2AX52 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Col6a4A2AX52 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.52■□□□□ 0.4
Col6a4A2AX52 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a4A2AX52 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a4A2AX52 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Col6a4A2AX52 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col6a4A2AX52 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.52■□□□□ 0.39
Col6a4A2AX52 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col6a4A2AX52 Gm37179-201ENSMUST00000194862 823 ntBASIC17.51■□□□□ 0.39
Col6a4A2AX52 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.51■□□□□ 0.39
Col6a4A2AX52 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Col6a4A2AX52 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a4A2AX52 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.5■□□□□ 0.39
Col6a4A2AX52 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.5■□□□□ 0.39
Col6a4A2AX52 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a4A2AX52 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.5■□□□□ 0.39
Col6a4A2AX52 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.5■□□□□ 0.39
Col6a4A2AX52 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.5■□□□□ 0.39
Col6a4A2AX52 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a4A2AX52 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a4A2AX52 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.5■□□□□ 0.39
Col6a4A2AX52 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a4A2AX52 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col6a4A2AX52 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Col6a4A2AX52 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a4A2AX52 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col6a4A2AX52 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Col6a4A2AX52 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.49■□□□□ 0.39
Col6a4A2AX52 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col6a4A2AX52 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.49■□□□□ 0.39
Col6a4A2AX52 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col6a4A2AX52 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col6a4A2AX52 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col6a4A2AX52 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col6a4A2AX52 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col6a4A2AX52 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col6a4A2AX52 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col6a4A2AX52 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.48■□□□□ 0.39
Col6a4A2AX52 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col6a4A2AX52 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Col6a4A2AX52 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col6a4A2AX52 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col6a4A2AX52 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms