Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Ubr4A2AN08 Gm13168-201ENSMUST00000121771 632 ntBASIC11.37□□□□□ -0.59
Ubr4A2AN08 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ubr4A2AN08 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ubr4A2AN08 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Ubr4A2AN08 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.37□□□□□ -0.59
Ubr4A2AN08 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ubr4A2AN08 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC11.37□□□□□ -0.59
Ubr4A2AN08 AC153524.1-201ENSMUST00000220436 1935 ntBASIC11.37□□□□□ -0.59
Ubr4A2AN08 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ubr4A2AN08 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ubr4A2AN08 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.36□□□□□ -0.59
Ubr4A2AN08 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC11.36□□□□□ -0.59
Ubr4A2AN08 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC11.36□□□□□ -0.59
Ubr4A2AN08 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ubr4A2AN08 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ubr4A2AN08 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ubr4A2AN08 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ubr4A2AN08 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ubr4A2AN08 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ubr4A2AN08 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.36□□□□□ -0.59
Ubr4A2AN08 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ubr4A2AN08 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ubr4A2AN08 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Ubr4A2AN08 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.34□□□□□ -0.59
Ubr4A2AN08 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.34□□□□□ -0.59
Ubr4A2AN08 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ubr4A2AN08 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ubr4A2AN08 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.34□□□□□ -0.59
Ubr4A2AN08 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ubr4A2AN08 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ubr4A2AN08 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ubr4A2AN08 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Ubr4A2AN08 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ubr4A2AN08 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC11.33□□□□□ -0.6
Ubr4A2AN08 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ubr4A2AN08 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ubr4A2AN08 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC11.32□□□□□ -0.6
Ubr4A2AN08 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Ubr4A2AN08 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ubr4A2AN08 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubr4A2AN08 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubr4A2AN08 Gm10620-201ENSMUST00000098379 1332 ntBASIC11.32□□□□□ -0.6
Ubr4A2AN08 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubr4A2AN08 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubr4A2AN08 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubr4A2AN08 Gm10209-201ENSMUST00000203397 1607 ntBASIC11.32□□□□□ -0.6
Ubr4A2AN08 Smad6-203ENSMUST00000179458 273 ntBASIC11.32□□□□□ -0.6
Ubr4A2AN08 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ubr4A2AN08 Fezf2-202ENSMUST00000224023 1917 ntBASIC11.32□□□□□ -0.6
Ubr4A2AN08 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubr4A2AN08 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubr4A2AN08 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Ubr4A2AN08 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ubr4A2AN08 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC11.31□□□□□ -0.6
Ubr4A2AN08 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubr4A2AN08 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubr4A2AN08 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubr4A2AN08 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ubr4A2AN08 Gm8770-201ENSMUST00000121113 1109 ntBASIC11.31□□□□□ -0.6
Ubr4A2AN08 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ubr4A2AN08 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubr4A2AN08 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Ubr4A2AN08 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ubr4A2AN08 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubr4A2AN08 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC11.3□□□□□ -0.6
Ubr4A2AN08 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.3□□□□□ -0.6
Ubr4A2AN08 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC11.3□□□□□ -0.6
Ubr4A2AN08 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC11.3□□□□□ -0.6
Ubr4A2AN08 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubr4A2AN08 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubr4A2AN08 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubr4A2AN08 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubr4A2AN08 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.3□□□□□ -0.6
Ubr4A2AN08 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ubr4A2AN08 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubr4A2AN08 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC11.3□□□□□ -0.6
Ubr4A2AN08 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ubr4A2AN08 Gm7160-202ENSMUST00000188519 1027 ntBASIC11.29□□□□□ -0.6
Ubr4A2AN08 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ubr4A2AN08 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ubr4A2AN08 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ubr4A2AN08 Gm20049-201ENSMUST00000219950 730 ntBASIC11.29□□□□□ -0.6
Ubr4A2AN08 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ubr4A2AN08 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.29□□□□□ -0.6
Ubr4A2AN08 Krt8-ps-201ENSMUST00000208495 945 ntBASIC11.29□□□□□ -0.6
Ubr4A2AN08 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ubr4A2AN08 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ubr4A2AN08 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ubr4A2AN08 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ubr4A2AN08 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ubr4A2AN08 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ubr4A2AN08 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ubr4A2AN08 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Ubr4A2AN08 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ubr4A2AN08 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.28□□□□□ -0.6
Ubr4A2AN08 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ubr4A2AN08 Gm42778-201ENSMUST00000199644 553 ntBASIC11.28□□□□□ -0.6
Ubr4A2AN08 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ubr4A2AN08 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms