Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12-1A0N8R1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav12-1A0N8R1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trav12-1A0N8R1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12-1A0N8R1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12-1A0N8R1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12-1A0N8R1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12-1A0N8R1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trav12-1A0N8R1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12-1A0N8R1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12-1A0N8R1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trav12-1A0N8R1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12-1A0N8R1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trav12-1A0N8R1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav12-1A0N8R1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12-1A0N8R1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12-1A0N8R1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12-1A0N8R1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.34■□□□□ 0.37
Trav12-1A0N8R1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12-1A0N8R1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12-1A0N8R1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12-1A0N8R1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trav12-1A0N8R1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12-1A0N8R1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12-1A0N8R1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12-1A0N8R1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav12-1A0N8R1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trav12-1A0N8R1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav12-1A0N8R1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trav12-1A0N8R1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav12-1A0N8R1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trav12-1A0N8R1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.33■□□□□ 0.36
Trav12-1A0N8R1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav12-1A0N8R1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trav12-1A0N8R1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12-1A0N8R1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12-1A0N8R1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12-1A0N8R1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12-1A0N8R1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12-1A0N8R1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav12-1A0N8R1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12-1A0N8R1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12-1A0N8R1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12-1A0N8R1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12-1A0N8R1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12-1A0N8R1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav12-1A0N8R1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12-1A0N8R1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12-1A0N8R1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12-1A0N8R1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12-1A0N8R1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12-1A0N8R1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12-1A0N8R1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12-1A0N8R1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav12-1A0N8R1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav12-1A0N8R1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12-1A0N8R1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.3■□□□□ 0.36
Trav12-1A0N8R1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12-1A0N8R1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12-1A0N8R1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12-1A0N8R1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12-1A0N8R1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-1A0N8R1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-1A0N8R1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-1A0N8R1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-1A0N8R1 Gm11175-201ENSMUST00000116172 543 ntBASIC17.29■□□□□ 0.36
Trav12-1A0N8R1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-1A0N8R1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-1A0N8R1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-1A0N8R1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Trav12-1A0N8R1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-1A0N8R1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-1A0N8R1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Trav12-1A0N8R1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-1A0N8R1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-1A0N8R1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-1A0N8R1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-1A0N8R1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-1A0N8R1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-1A0N8R1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav12-1A0N8R1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.27■□□□□ 0.36
Trav12-1A0N8R1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav12-1A0N8R1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav12-1A0N8R1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Trav12-1A0N8R1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav12-1A0N8R1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav12-1A0N8R1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-1A0N8R1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-1A0N8R1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-1A0N8R1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-1A0N8R1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-1A0N8R1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav12-1A0N8R1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-1A0N8R1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-1A0N8R1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-1A0N8R1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-1A0N8R1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms