Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9-4A0A0B4J1K2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.6■□□□□ 0.09
Trav9-4A0A0B4J1K2 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.6■□□□□ 0.09
Trav9-4A0A0B4J1K2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.6■□□□□ 0.09
Trav9-4A0A0B4J1K2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.6■□□□□ 0.09
Trav9-4A0A0B4J1K2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9-4A0A0B4J1K2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav9-4A0A0B4J1K2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav9-4A0A0B4J1K2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.59■□□□□ 0.09
Trav9-4A0A0B4J1K2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-4A0A0B4J1K2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-4A0A0B4J1K2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav9-4A0A0B4J1K2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-4A0A0B4J1K2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-4A0A0B4J1K2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-4A0A0B4J1K2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-4A0A0B4J1K2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-4A0A0B4J1K2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav9-4A0A0B4J1K2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav9-4A0A0B4J1K2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9-4A0A0B4J1K2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav9-4A0A0B4J1K2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav9-4A0A0B4J1K2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9-4A0A0B4J1K2 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.58■□□□□ 0.08
Trav9-4A0A0B4J1K2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9-4A0A0B4J1K2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav9-4A0A0B4J1K2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav9-4A0A0B4J1K2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9-4A0A0B4J1K2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9-4A0A0B4J1K2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav9-4A0A0B4J1K2 Gm10399-202ENSMUST00000202768 748 ntBASIC15.57■□□□□ 0.08
Trav9-4A0A0B4J1K2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav9-4A0A0B4J1K2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav9-4A0A0B4J1K2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9-4A0A0B4J1K2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9-4A0A0B4J1K2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9-4A0A0B4J1K2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9-4A0A0B4J1K2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav9-4A0A0B4J1K2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9-4A0A0B4J1K2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9-4A0A0B4J1K2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9-4A0A0B4J1K2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9-4A0A0B4J1K2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9-4A0A0B4J1K2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.56■□□□□ 0.08
Trav9-4A0A0B4J1K2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9-4A0A0B4J1K2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.56■□□□□ 0.08
Trav9-4A0A0B4J1K2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9-4A0A0B4J1K2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
Trav9-4A0A0B4J1K2 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.55■□□□□ 0.08
Trav9-4A0A0B4J1K2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-4A0A0B4J1K2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.55■□□□□ 0.08
Trav9-4A0A0B4J1K2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.55■□□□□ 0.08
Trav9-4A0A0B4J1K2 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.55■□□□□ 0.08
Trav9-4A0A0B4J1K2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-4A0A0B4J1K2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trav9-4A0A0B4J1K2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-4A0A0B4J1K2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-4A0A0B4J1K2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9-4A0A0B4J1K2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav9-4A0A0B4J1K2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-4A0A0B4J1K2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-4A0A0B4J1K2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-4A0A0B4J1K2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-4A0A0B4J1K2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-4A0A0B4J1K2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav9-4A0A0B4J1K2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-4A0A0B4J1K2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-4A0A0B4J1K2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-4A0A0B4J1K2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-4A0A0B4J1K2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-4A0A0B4J1K2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-4A0A0B4J1K2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9-4A0A0B4J1K2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav9-4A0A0B4J1K2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9-4A0A0B4J1K2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9-4A0A0B4J1K2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9-4A0A0B4J1K2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav9-4A0A0B4J1K2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9-4A0A0B4J1K2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9-4A0A0B4J1K2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9-4A0A0B4J1K2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9-4A0A0B4J1K2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9-4A0A0B4J1K2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9-4A0A0B4J1K2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9-4A0A0B4J1K2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav9-4A0A0B4J1K2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav9-4A0A0B4J1K2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9-4A0A0B4J1K2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav9-4A0A0B4J1K2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9-4A0A0B4J1K2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav9-4A0A0B4J1K2 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.52■□□□□ 0.08
Trav9-4A0A0B4J1K2 Gm40881-201ENSMUST00000223397 166 ntBASIC15.52■□□□□ 0.08
Trav9-4A0A0B4J1K2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.52■□□□□ 0.08
Trav9-4A0A0B4J1K2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9-4A0A0B4J1K2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.52■□□□□ 0.07
Trav9-4A0A0B4J1K2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9-4A0A0B4J1K2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9-4A0A0B4J1K2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9-4A0A0B4J1K2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9-4A0A0B4J1K2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms