Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.54■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.53■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.53■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.53■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.52■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Tcrg-V4A0A0B4J1J8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.49■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC15.49■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.48■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.47■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Gm8109-201ENSMUST00000194076 746 ntBASIC15.46■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tcrg-V4A0A0B4J1J8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.45■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.45■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms