Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Gm43017-201ENSMUST00000198296 752 ntBASIC21.38■■□□□ 1.01
Igkv16-104A0A0B4J1I1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.38■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.38■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igkv16-104A0A0B4J1I1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.36■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.35■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.35■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.34■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.34■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Gm8493-201ENSMUST00000196881 489 ntBASIC21.34■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.34■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv16-104A0A0B4J1I1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.33■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Igkv16-104A0A0B4J1I1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Igkv16-104A0A0B4J1I1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Igkv16-104A0A0B4J1I1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv16-104A0A0B4J1I1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv16-104A0A0B4J1I1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv16-104A0A0B4J1I1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.32■■□□□ 1
Igkv16-104A0A0B4J1I1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv16-104A0A0B4J1I1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Igkv16-104A0A0B4J1I1 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.32■■□□□ 1
Igkv16-104A0A0B4J1I1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.32■■□□□ 1
Igkv16-104A0A0B4J1I1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv16-104A0A0B4J1I1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.32■■□□□ 1
Igkv16-104A0A0B4J1I1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv16-104A0A0B4J1I1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Igkv16-104A0A0B4J1I1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.31■■□□□ 1
Igkv16-104A0A0B4J1I1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.31■■□□□ 1
Igkv16-104A0A0B4J1I1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Igkv16-104A0A0B4J1I1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Igkv16-104A0A0B4J1I1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.3■■□□□ 1
Igkv16-104A0A0B4J1I1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.3■■□□□ 1
Igkv16-104A0A0B4J1I1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv16-104A0A0B4J1I1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv16-104A0A0B4J1I1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Igkv16-104A0A0B4J1I1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.29■■□□□ 1
Igkv16-104A0A0B4J1I1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv16-104A0A0B4J1I1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Igkv16-104A0A0B4J1I1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.29■■□□□ 1
Igkv16-104A0A0B4J1I1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv16-104A0A0B4J1I1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Igkv16-104A0A0B4J1I1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.28■■□□□ 1
Igkv16-104A0A0B4J1I1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
Igkv16-104A0A0B4J1I1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.28■■□□□ 1
Igkv16-104A0A0B4J1I1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Igkv16-104A0A0B4J1I1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.28■■□□□ 1
Igkv16-104A0A0B4J1I1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Igkv16-104A0A0B4J1I1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Igkv16-104A0A0B4J1I1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Igkv16-104A0A0B4J1I1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.27■■□□□ 1
Igkv16-104A0A0B4J1I1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Igkv16-104A0A0B4J1I1 Gm43173-201ENSMUST00000202246 593 ntBASIC21.27■■□□□ 1
Igkv16-104A0A0B4J1I1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Igkv16-104A0A0B4J1I1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Igkv16-104A0A0B4J1I1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.26■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Gm12251-201ENSMUST00000117893 792 ntBASIC21.26■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.26■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.26■□□□□ 0.99
Igkv16-104A0A0B4J1I1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.25■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Igkv16-104A0A0B4J1I1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Igkv16-104A0A0B4J1I1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Igkv16-104A0A0B4J1I1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms