Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv12-1A0A0B4J1H0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.5■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.49■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.49■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv12-1A0A0B4J1H0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.49■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.49■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.48■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.48■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.48■□□□□ 0.55
Trbv12-1A0A0B4J1H0 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.48■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.47■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Gm7417-201ENSMUST00000192950 473 ntBASIC18.47■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Gm9959-201ENSMUST00000068277 390 ntBASIC18.47■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.47■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Gm45102-201ENSMUST00000207427 857 ntBASIC18.46■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.45■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Etf1-202ENSMUST00000180351 108 ntBASIC18.44■□□□□ 0.54
Trbv12-1A0A0B4J1H0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.43■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trbv12-1A0A0B4J1H0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.42■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv12-1A0A0B4J1H0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.41■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.41■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Rps24-207ENSMUST00000224568 714 ntBASIC18.4■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trbv12-1A0A0B4J1H0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.4■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv12-1A0A0B4J1H0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.39■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.39■□□□□ 0.54
Trbv12-1A0A0B4J1H0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trbv12-1A0A0B4J1H0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv12-1A0A0B4J1H0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trbv12-1A0A0B4J1H0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms