Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv15A0A0A6YYE3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv15A0A0A6YYE3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv15A0A0A6YYE3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv15A0A0A6YYE3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trbv15A0A0A6YYE3 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.3■□□□□ 0.36
Trbv15A0A0A6YYE3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.3■□□□□ 0.36
Trbv15A0A0A6YYE3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv15A0A0A6YYE3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv15A0A0A6YYE3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trbv15A0A0A6YYE3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.3■□□□□ 0.36
Trbv15A0A0A6YYE3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trbv15A0A0A6YYE3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.29■□□□□ 0.36
Trbv15A0A0A6YYE3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trbv15A0A0A6YYE3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv15A0A0A6YYE3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Trbv15A0A0A6YYE3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv15A0A0A6YYE3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.29■□□□□ 0.36
Trbv15A0A0A6YYE3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trbv15A0A0A6YYE3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trbv15A0A0A6YYE3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv15A0A0A6YYE3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Trbv15A0A0A6YYE3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv15A0A0A6YYE3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv15A0A0A6YYE3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv15A0A0A6YYE3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv15A0A0A6YYE3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv15A0A0A6YYE3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trbv15A0A0A6YYE3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv15A0A0A6YYE3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv15A0A0A6YYE3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.28■□□□□ 0.36
Trbv15A0A0A6YYE3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv15A0A0A6YYE3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trbv15A0A0A6YYE3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv15A0A0A6YYE3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv15A0A0A6YYE3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trbv15A0A0A6YYE3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv15A0A0A6YYE3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv15A0A0A6YYE3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv15A0A0A6YYE3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.27■□□□□ 0.36
Trbv15A0A0A6YYE3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv15A0A0A6YYE3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv15A0A0A6YYE3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.27■□□□□ 0.35
Trbv15A0A0A6YYE3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trbv15A0A0A6YYE3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv15A0A0A6YYE3 Iqck-206ENSMUST00000208658 2891 ntBASIC17.26■□□□□ 0.35
Trbv15A0A0A6YYE3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv15A0A0A6YYE3 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.26■□□□□ 0.35
Trbv15A0A0A6YYE3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv15A0A0A6YYE3 Golph3-202ENSMUST00000226517 2359 ntBASIC17.26■□□□□ 0.35
Trbv15A0A0A6YYE3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv15A0A0A6YYE3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Trbv15A0A0A6YYE3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv15A0A0A6YYE3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv15A0A0A6YYE3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv15A0A0A6YYE3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv15A0A0A6YYE3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv15A0A0A6YYE3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv15A0A0A6YYE3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.25■□□□□ 0.35
Trbv15A0A0A6YYE3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trbv15A0A0A6YYE3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv15A0A0A6YYE3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv15A0A0A6YYE3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trbv15A0A0A6YYE3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv15A0A0A6YYE3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trbv15A0A0A6YYE3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv15A0A0A6YYE3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv15A0A0A6YYE3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trbv15A0A0A6YYE3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.24■□□□□ 0.35
Trbv15A0A0A6YYE3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv15A0A0A6YYE3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv15A0A0A6YYE3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv15A0A0A6YYE3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv15A0A0A6YYE3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv15A0A0A6YYE3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv15A0A0A6YYE3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trbv15A0A0A6YYE3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv15A0A0A6YYE3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv15A0A0A6YYE3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv15A0A0A6YYE3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.23■□□□□ 0.35
Trbv15A0A0A6YYE3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv15A0A0A6YYE3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.23■□□□□ 0.35
Trbv15A0A0A6YYE3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv15A0A0A6YYE3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv15A0A0A6YYE3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trbv15A0A0A6YYE3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.22■□□□□ 0.35
Trbv15A0A0A6YYE3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.22■□□□□ 0.35
Trbv15A0A0A6YYE3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv15A0A0A6YYE3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trbv15A0A0A6YYE3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv15A0A0A6YYE3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv15A0A0A6YYE3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv15A0A0A6YYE3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv15A0A0A6YYE3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trbv15A0A0A6YYE3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv15A0A0A6YYE3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv15A0A0A6YYE3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trbv15A0A0A6YYE3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv15A0A0A6YYE3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trbv15A0A0A6YYE3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms