Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-5A0A075B6B9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-5A0A075B6B9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6d-5A0A075B6B9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6d-5A0A075B6B9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Trav6d-5A0A075B6B9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6d-5A0A075B6B9 Gm11599-201ENSMUST00000118720 878 ntBASIC16.83■□□□□ 0.28
Trav6d-5A0A075B6B9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav6d-5A0A075B6B9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6d-5A0A075B6B9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav6d-5A0A075B6B9 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.83■□□□□ 0.28
Trav6d-5A0A075B6B9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.83■□□□□ 0.28
Trav6d-5A0A075B6B9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6d-5A0A075B6B9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trav6d-5A0A075B6B9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav6d-5A0A075B6B9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-5A0A075B6B9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-5A0A075B6B9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-5A0A075B6B9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-5A0A075B6B9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-5A0A075B6B9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav6d-5A0A075B6B9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6d-5A0A075B6B9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6d-5A0A075B6B9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6d-5A0A075B6B9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6d-5A0A075B6B9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6d-5A0A075B6B9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav6d-5A0A075B6B9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav6d-5A0A075B6B9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav6d-5A0A075B6B9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6d-5A0A075B6B9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6d-5A0A075B6B9 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.81■□□□□ 0.28
Trav6d-5A0A075B6B9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav6d-5A0A075B6B9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav6d-5A0A075B6B9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-5A0A075B6B9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-5A0A075B6B9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-5A0A075B6B9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav6d-5A0A075B6B9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav6d-5A0A075B6B9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-5A0A075B6B9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-5A0A075B6B9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav6d-5A0A075B6B9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6d-5A0A075B6B9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-5A0A075B6B9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-5A0A075B6B9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-5A0A075B6B9 Iqck-206ENSMUST00000208658 2891 ntBASIC16.79■□□□□ 0.28
Trav6d-5A0A075B6B9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.79■□□□□ 0.28
Trav6d-5A0A075B6B9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.79■□□□□ 0.28
Trav6d-5A0A075B6B9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-5A0A075B6B9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Trav6d-5A0A075B6B9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6d-5A0A075B6B9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-5A0A075B6B9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-5A0A075B6B9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav6d-5A0A075B6B9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-5A0A075B6B9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-5A0A075B6B9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav6d-5A0A075B6B9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-5A0A075B6B9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-5A0A075B6B9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav6d-5A0A075B6B9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-5A0A075B6B9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-5A0A075B6B9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6d-5A0A075B6B9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav6d-5A0A075B6B9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6d-5A0A075B6B9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav6d-5A0A075B6B9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6d-5A0A075B6B9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trav6d-5A0A075B6B9 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.77■□□□□ 0.28
Trav6d-5A0A075B6B9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.77■□□□□ 0.28
Trav6d-5A0A075B6B9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Trav6d-5A0A075B6B9 Golph3-202ENSMUST00000226517 2359 ntBASIC16.77■□□□□ 0.27
Trav6d-5A0A075B6B9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6d-5A0A075B6B9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-5A0A075B6B9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trav6d-5A0A075B6B9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trav6d-5A0A075B6B9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-5A0A075B6B9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav6d-5A0A075B6B9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-5A0A075B6B9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trav6d-5A0A075B6B9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-5A0A075B6B9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-5A0A075B6B9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-5A0A075B6B9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-5A0A075B6B9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-5A0A075B6B9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-5A0A075B6B9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav6d-5A0A075B6B9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-5A0A075B6B9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.75■□□□□ 0.27
Trav6d-5A0A075B6B9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav6d-5A0A075B6B9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-5A0A075B6B9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-5A0A075B6B9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav6d-5A0A075B6B9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.75■□□□□ 0.27
Trav6d-5A0A075B6B9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-5A0A075B6B9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-5A0A075B6B9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-5A0A075B6B9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-5A0A075B6B9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms